XLOC_021828 (wu:fc63a07)


Basic Information

Item Value
gene id XLOC_021828
gene name wu:fc63a07
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 33934228 ~ 33953106 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043278
gtttttttttctgtggaagaCTCTCGGACAGGAGGTTGAGATACAGCACAAATAAATTAGCATTCGACAATTACAACGGAATATGGAGTCCGTACACTGCAACTGGAGGAATGTATCACGAGCTAATCAGATCTCTAAAAGATCAAGACCCATGTCCGAAACCTTATCCAAACTGGCTCAGCTCATCACCTGCATGGAGTACAAACCAAAATCACAAACGTCTTCCTCCATCTGCAAGGACGCCAGCCAGAAACCCTCCGAAATGAACGCTCTTGTGCGTCACCAGCAAAAAGAGCGCACCCTGCAAAAACTC
>TCONS_00043279
CTCGCAATGgatgatgggagttgtagtttgccAAACTGCCTGAACTAAGTTAGAAGCGCGTGGTTGTAGAAGTGACAGTCCGTTTGCATCTCGCTTCAGAATTTCGTGCATTTAACGTTATTGAACCTCAGAACAGCCGTTGCAATGTCCACAAATACGGTCGAGAGACCCATGTTGTGCGATACAACGTCATCGAGTGGGAATATGGAGTCCGTACACTGCAACTGGAGGAATGTATCACGAGCTAATCAGATCTCTAAAAGATCAAGACCCATGTCCGAAACCTTATCCAAACTGGCTCAGCTCATCACCTGCATGGAGTACAAACCAAAATCACAAACGTCTTCCTCCATCTGCAAGGACGCCAGCCAGAAACCCTCCGAAATGAACGCTCTTGTGCGTCACCAGCAAAAAGAGCGCACCCTGCAAAAACTCCACAGCTGTCAACGGTGTAACCAACAGTTCGCTTTGCTTTCCAGTCTGCAGTTACACAAATGCCCTCGTTCTTTATCCGTGTGCCAAACATGCAATGGGAAAATGCCAAAGGGATCTTCATGCGCCTCCTGTGGGAGTAAACCCTCAGTTCCCAACTGCACAGAAGATCCCATCCATCAAGGCAACAGCCCATGCGGACAAGCCTTCAGCCACAAACAAGATCTGCTCCACCACCAGCAGGCCGGAGACTGTCAGCCTGCGAACACTCTCAAAGCTGCTTCCTTGCCACCATTTAAACAAAAAGCCACATGCACCCTGTGCTCTAAAACTTTCCGTGCCCCCAGAGGTCTTGCCTGCCACATGCGCTTTTCCCACGCACCAAGAAAAAGAAGCGCGAATTTAGAAAAGGATGTGCATTTTGGGAATATGGAGAGGAATGAGAGCGTCTCGAGTGCGCTCTTTCAATGCCGTTCCTGTGATAAATCGTTTTCCAAGACATCGCTTCTCCATCGGCATAGGAAGGAAGAACACAGACGGGATGTAAAGGTGAGGAATACGTTTAGAAACTCAGGGAAGATCACCAGACGGAAGCGGAAAAGTGGGATATATCCATGCCTGCACTGCGGAGCCGAGTTCCTGCATCATCTGACAAGATTGGCGCATTTTAGAAACTACACCGTCCACCATGAGATGCACCTCAAATTAAGTAACAAATCAACCGGTGTTTATGCAACCGCTGCTAAGCTCAAGCTGAAGCCCGCAAGAAAGCTCCAAAAAGATAAACCTGAAGGGAAGAAAGGAAGACCGAAGAAAGTTCTCCCTGTTCACATTGAGGAAACTAAAGAAGAGGAGGAAGTGGAAGAGAATACACTGGAAgatgatagtgatgatgatgaggaagaCGAGGATGCCGAGTACCCTTGTACATCATGCGATCAGGTCTTCAGTTCCACAGCTGCTCTGTTTGTTCATGAGAAAATCCATGATCAGTTGCCGGCGGAAGTAGATGATGAGCCGGCCGAGacgtgcaggtgttgtagtgtgTGTTCAGGCGGGATTCCTCTACACATGCTTCCTGAAGATGGCTTCGAGGGGGAAGTCTATCACTGTGTGCCATGTGCTGAGACCTTCAAAGCTCTGGATGCTTTTCTAGAGCACTGCCAGAAACATCTGATACGTGAACATGAGGATGAGTTCAGTGATGACTGAAAGAGTTtgcttttttgccattttttccTCTTGAGAACAAAAGATAGTTGCATATTATtagacaaa

Function

symbol description
wu:fc63a07 Predicted to enable metal ion binding activity.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094469

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043278 False 313 mRNA 0.46 2 33934228 33951831
TCONS_00043279 True 1710 mRNA 0.48 2 33947874 33953106

Neighbor

gene id symbol gene type direction distance location
XLOC_021827 cs coding upstream 5912 33907899 ~ 33928316 (+)
XLOC_021825 CR381531.2 coding upstream 32891 33777519 ~ 33901337 (+)
XLOC_021826 CR381531.1 coding upstream 104038 33828665 ~ 33830190 (+)
XLOC_021824 CR354542.1 coding upstream 173563 33759747 ~ 33760665 (+)
XLOC_021823 si:ch211-210c8.6 coding upstream 176486 33752275 ~ 33757742 (+)
XLOC_021829 snrpg coding downstream 4244 33957350 ~ 33961989 (+)
XLOC_021830 plpbp coding downstream 10513 33963619 ~ 33976116 (+)
XLOC_021831 NA coding downstream 25605 33978711 ~ 33983432 (+)
XLOC_021832 fam50a coding downstream 34276 33987382 ~ 34023632 (+)
XLOC_021833 AL954678.1 coding downstream 49651 34002757 ~ 34002873 (+)
XLOC_021821 CT027694.1 non-coding upstream 396059 33538051 ~ 33538169 (+)
XLOC_021820 NA non-coding upstream 474963 33455563 ~ 33459265 (+)
XLOC_021817 dre-mir-205 non-coding upstream 643867 33290273 ~ 33290361 (+)
XLOC_021837 NA non-coding downstream 811837 34764943 ~ 34768352 (+)
XLOC_021838 CR352218.1 non-coding downstream 896609 34849715 ~ 34987363 (+)
XLOC_021839 NA non-coding downstream 993341 34946447 ~ 34948499 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_03502743_03504170 NA coding CI01000001 null 3502687 ~ 3504170 (-)