XLOC_021837


Basic Information

Item Value
gene id XLOC_021837
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 34764943 ~ 34768352 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044860
TTAAAAGCAGGTGTCAAAAGACCAGCTGTGTTCATTAGGCCTAGaaatgtaaatgcagcctaaatgAAGAGGTACTTTTAATTTGACATGTCTCGACAGGAACAGATGTCATCATTTAAGACTTCTGGACATTGTTGCCTGGAACGCAAACTGGGAGGAATGGGAGAGAGAGATGAGCAGCAGCTGTGAATCCAGgcgtctctctctctcagccCAAGGCCTCCTGCTGACAGACAGATTCTTGAATGGCTGATGGTCAGAATAAAGAGACACAGATGTGGACAATTATCTCCGGTTCACTCATGCGCGCCGCACGCGTCCCTCTCCCCGGCTCTGCGCGGCTCTCGGCGGGTCTCCGAGGACAAGATCGACCCCTGGAAATGATCATCACACCTGCGTGAAGGTAATAAGATGGCGGTTTGAGAGCCGGTGTGATTACCGGGCTCGCAGGCGTGGAGTGTGATTGGCAGCAGAATGTAGACGGTGTGATTATGGGGCGACGGATCTTGGCTGTTATTTCTCCTGGTGCAAAGGTGTTGAACGTGTGGATGCTGGAAATATGTCGAAGCATCAGTTCTAATAGCTGACTCAGTCCCTTATATGACACAGTGTTGGTGTGTGCCATCTGTATATGTCTTAGTGTTGAGTTTTGCCCAAATATCTCCAAAAACAGATTGAATGACATCATCTTCAAGTAATTCATAGTTtcacaggcccatagccagcctggtaaaaggggtgtttttttgttttttttttttttttttcaagaagtgGACCTTTTTGTGGTTATAGGCCTCATTTAGGATACTATGTATTACTATTTTTGGCTACTATTTTAAATTCtgcattttagtaacattttaagcactattttagctgaaatagatTGTCAGATGCTAATCATAATAAAAAAGGACATTTGAAAATTCAGGGATAACAAcatagccaaaaaaataaaaataaaatcatattaattTTTGTCACATGTTCATtagtcattttttgtttcaagaatagaATACAAGTCacttgtttaattgttttattttaaataatgtttaaaaacaatatagaTGACTTCACCTacgtcagattgtatgttttcttgcacactGGATGTTGAactcatgaaaaaaataattgtgtgcaCTGGCCAAAACTGATTCGCTAAAGTCACAACA

Function

GO:

id name namespace
GO:0005794 Golgi apparatus cellular_component
GO:0012505 endomembrane system cellular_component
GO:0043227 membrane-bounded organelle cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044860 True 1184 lncRNA 0.40 2 34764943 34768352

Neighbor

gene id symbol gene type direction distance location
XLOC_021836 plxna1a coding upstream 11132 34321237 ~ 34753811 (+)
XLOC_021835 chchd6a coding upstream 579924 34047413 ~ 34185019 (+)
XLOC_021834 sars1 coding upstream 721292 34030550 ~ 34043651 (+)
XLOC_021832 fam50a coding upstream 741311 33987382 ~ 34023632 (+)
XLOC_021833 AL954678.1 coding upstream 762070 34002757 ~ 34002873 (+)
XLOC_021838 CR352218.1 coding downstream 81363 34849715 ~ 34987363 (+)
XLOC_021839 NA coding downstream 178095 34946447 ~ 34948499 (+)
XLOC_021840 CHST13 coding downstream 222341 34990693 ~ 35025117 (+)
XLOC_021841 CU459147.1 coding downstream 427388 35195740 ~ 35208386 (+)
XLOC_021842 si:ch211-225h24.2 coding downstream 634345 35402697 ~ 35498518 (+)
XLOC_021831 NA non-coding upstream 781511 33978711 ~ 33983432 (+)
XLOC_021826 CR381531.1 non-coding upstream 934753 33828665 ~ 33830190 (+)
XLOC_021824 CR354542.1 non-coding upstream 1004278 33759747 ~ 33760665 (+)
XLOC_021821 CT027694.1 non-coding upstream 1226774 33538051 ~ 33538169 (+)
XLOC_021843 NA non-coding downstream 716542 35484894 ~ 35487575 (+)
XLOC_021845 NA non-coding downstream 788838 35557190 ~ 35560512 (+)

Expression


Co-expression Network