XLOC_021839


Basic Information

Item Value
gene id XLOC_021839
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 34946447 ~ 34948499 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044862
AACAGCGGCCAATGCAAGAGCCAGGAAGCTAAATAAGACTTTAAGGGTCAAGAAGAGAAAAGCCTGTCAGGGAAATAATAGATCATTCTGGGTTTTTTGCTGACTGTTGCATTAAAGAATTAAAGTTTTAGAATTTAGAAGTGCAACTTTAGGTTTGAGGGAGGTGTCGATTGTGGAAACGTGGTCATGTGTATTGACTGACTGGACAAATTAAGCAGGTATTGATCGTACGTATTTCTGTTTGCTGTTGACGGAGAATAATactatatttttacaataaagaatcctgttttgtgttgcttcaCCCTTCCCAATTTGCATAATTTACAGTTAAACAAAAGCAAATGGCTGCTGAAATGATTTGATGTTTAAGCAcgctgctagcatgttttaacaaacaACTGCTGACatatttagcatgttgctagcatgttttaacaaacaACTGCTGACATATTTTAGCatgctgctagcatgttttaacaaacaACTGCTGAcATATTTTAGCATGCTGCTAGCATGTTT
>TCONS_00044863
AACAGCGGCCAATGCAAGAGCCAGGAAGCTAAATAAGACTTTAAGGGTCAAGAAGAGAAAAGCCTGTCAGGGAAATAATAGATCATTCTGGGTTTTTTGCTGACTGTTGCATTAAAGAATTAAAGTTTTAGAATTTAGAAGTGCAACTTTAGGTTTGAGGGAGGTGTCGATTGTGGAAACGTGGTCATGTGTATTGACTGACTGGACAAATTAAGCAGGTATTGATCGTACGTATTTCTGTTTGCTGTTGACGGAGAATAATactatatttttacaataaagaatcctgttttgtgttgcttcaCCCTTCCCAATTTGCATAATTTACAGTTAAACAAAAGCAAATGGCTGCTGAAATGATTTGATGTTTAAGCAcgctgctagcatgttttaacaaacaACTGCTGACatatttagcatgttgctagcatgttttaacaaacaACTGCTGACATATTTTAGCatgctgctagcatgttttaacaaacaACTGCTGAcATATTTTAGCatgctgctagcatgttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044862 False 525 lncRNA 0.37 2 34946447 34948235
TCONS_00044863 True 525 lncRNA 0.37 2 34946447 34948499

Neighbor

gene id symbol gene type direction distance location
XLOC_021837 NA coding upstream 178095 34764943 ~ 34768352 (+)
XLOC_021836 plxna1a coding upstream 192636 34321237 ~ 34753811 (+)
XLOC_021835 chchd6a coding upstream 761428 34047413 ~ 34185019 (+)
XLOC_021834 sars1 coding upstream 902796 34030550 ~ 34043651 (+)
XLOC_021833 AL954678.1 coding upstream 943574 34002757 ~ 34002873 (+)
XLOC_021840 CHST13 coding downstream 42194 34990693 ~ 35025117 (+)
XLOC_021841 CU459147.1 coding downstream 247241 35195740 ~ 35208386 (+)
XLOC_021842 si:ch211-225h24.2 coding downstream 454198 35402697 ~ 35498518 (+)
XLOC_021843 NA coding downstream 536395 35484894 ~ 35487575 (+)
XLOC_021844 acp1 coding downstream 556325 35504824 ~ 35537727 (+)
XLOC_021831 NA non-coding upstream 963015 33978711 ~ 33983432 (+)
XLOC_021826 CR381531.1 non-coding upstream 1116257 33828665 ~ 33830190 (+)
XLOC_021824 CR354542.1 non-coding upstream 1185782 33759747 ~ 33760665 (+)
XLOC_021845 NA non-coding downstream 608691 35557190 ~ 35560512 (+)
XLOC_021848 NA non-coding downstream 745773 35694272 ~ 35702721 (+)
XLOC_021851 NA non-coding downstream 774939 35723438 ~ 35727522 (+)

Expression


Co-expression Network