XLOC_021883 (march9)


Basic Information

Item Value
gene id XLOC_021883
gene name march9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36771593 ~ 36798620 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043357
GGCCTAAAGGaatcaataacaacaacaacaataatattaatgcgtaaaaaatatcaataaatatcaaaaacaagcaccaaacaacaacaacaataatcaatattaataatattcatacgTTACTAAAAGTCAAAATAACACGCTTTACTTCAGCCATACGACCTACACATGTAGTCAAAGATGTTCAAGAACCGGATCCGCATGTTTTTTAACGAACTGAAGGTGCTGGTTTTCATGCGATCCGGTTCTCGACGGTCCGACAGTGACGCAGAGTCGAACCGACGATCCGGCAGCAACATGAGGGGGCTCGGGATGGGCGGCTGCGGATGGCCGCCTTTCGTAGACTGCTCCAGCCGCGACGACGAGGAGGAATACTACGGCAGCGACCCGAGGCCGAGGAGCCTGGCGTTTGAGGAGAAAGACCCGAAACTGCAGGCGGGCCTGGACGCGGTCAGCCTGACCAGCAGCACCGGCAGCGGCATGAGGACACCCCAGTGTCGGATCTGCTTCCAAGGGCCCGAGCAGGGGGAGCTGTTGAGCCCGTGCCGCTGTGATGGCTCCGTGCGCTGCACTCATCAGCCGTGTCTGATCCGCTGGATCAGTGAAAGAGGCTCCTGGAGCTGCGAGCTCTGCTACTTCAAGTACCAGGTCCTGGCCATCAGCACCAAGAACCCACTGCAGTGGCAGGCCATCTCTCTGACGGTGATCGAGAAGGTGCAGATCGCCGCCATCATCCTGGGCTCACTCTTCCTCATCGCCAGTATCTCGTGGCTGGTCTGGTCTTCTCTCAGCCCGTCTGCCAAGTGGCAGCGCCAGGACCTGCTCTTCCAGATCTGCTATGGCATGTACGGCTTCATGGACATTGTGTGCATAGGCCTTATAATCCATGAGGGCTCGTCCGTGTACAGAATCTTCAAGCGCTGGCAGGCTGTGAACCAGCAGTGGAAAGTGTTGAACTATGAGAAGTCAAAGGACTTGGGTGACCCGTTGAGCTCCAGCAGTAAGGCGGGTGGCCGCGGCTCTCGCAGTAACCCTCACGGCCTGGCCAGCGGCAGCAGGGGCGCGCAGCGGGTGCGCAGGTTAAGGACTATCCTCAACCATCACTGCGGATACACCATCCTGCACATCCTCAGCCAACTGCGGCCCAGCGACCCGCGCCTCGGCACCGCCACCAACCGCGAAGTGGTCATGCGGGTCACCACTGTATGAGACGCCAACAAAACACACAATGCTGTCTCACGGCAAATcgtaacttttgatttagtggctaattcgtatgatctcattcgtaTGATTTACTACGATTTCCCCCAATGTTGGTTGGGTTTGGAGCCATGCCTCCTTTCAAAAATCGTAAATTTTCGTACAAATG

Function

symbol description
march9 Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MARCHF9 (membrane associated ring-CH-type finger 9).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081031-71 Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MARCHF9 (membrane associated ring-CH-type finger 9).

Ensembl:

ensembl_id ENSDARG00000055740

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043357 True 1372 mRNA 0.54 4 36771593 36798620

Neighbor

gene id symbol gene type direction distance location
XLOC_021882 tspan31 coding upstream 21292 36730713 ~ 36750301 (+)
XLOC_021881 gpr182 coding upstream 115953 36653376 ~ 36655640 (+)
XLOC_021880 pip4k2ca coding upstream 126458 36616717 ~ 36645135 (+)
XLOC_021879 igfbp6b coding upstream 165756 36601984 ~ 36605837 (+)
XLOC_021878 NA coding upstream 185842 36585179 ~ 36585751 (+)
XLOC_021885 NA coding downstream 44012 36842632 ~ 36845980 (+)
XLOC_021886 CR926464.1 coding downstream 93109 36891729 ~ 36895369 (+)
XLOC_021887 NA coding downstream 227730 37026350 ~ 37038409 (+)
XLOC_021888 cptp coding downstream 287539 37086159 ~ 37094205 (+)
XLOC_021889 NA coding downstream 314667 37113287 ~ 37118114 (+)
XLOC_021877 FO704757.1 non-coding upstream 280359 36491114 ~ 36491234 (+)
XLOC_021876 NA non-coding upstream 282964 36458347 ~ 36488629 (+)
XLOC_021875 NA non-coding upstream 351315 36418119 ~ 36420278 (+)
XLOC_021874 NA non-coding upstream 405676 36364905 ~ 36365917 (+)
XLOC_021891 NA non-coding downstream 428561 37227181 ~ 37433229 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_01902970_01917410 MARCH9 coding CI01000001 null 1902429 ~ 1917454 (-)
bowfin (Amia calva) AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 misc CM030126.1 CM030126.1 12980804 ~ 12992725 (+)