XLOC_021892


Basic Information

Item Value
gene id XLOC_021892
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 37286414 ~ 37287626 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044883
tgctctaggctagtttttaacagcagatggtgctctaggctagtatttagcAGCAGATAATGCTTtacactagtttttaacagtagacggcgctctaggctagtttttaacaacctatggtgctctaggctagtttttaatagcaggcgacgctctaggctagttttttttcaAGCAGATGCCACTCtatactagtttttaacagctaaCAGAGATCCAGACTTGGCTAGTTTTAAAAGCAGATTGTGCTAGGCTATTATTTTCAAGACGCTGCTCatggctagtttataacagcagatgacgctctaggctagcttttaaccaCAGACAATGTTCTAGGCTAGCTTTTATCCAAaaacagcactctaggctagttttttgaCTGCAAACAGAGCTCCAAGGTAGTTTTTTTAACAGGCTAGTTTTTGacaaatggcactctaggctagttttttacagcagatgacgCTTTacgctagattttaacagcagatggcgcagATGGCGTTCTAAGCTAATTTTTAACAAccaatggtgctctaggctagGCTAgaatagtttttaaaagcagactgCACTCTAGGGTAGTATTTTCAGaacgttgctctaggctagtttatattaacagagggcgctctagacaagtatttaacagcagatggcaatgTAGACTGTTTTTTAACAGACGGCAGTCGACATTAGTTAAAAGTAGATGGTtccctaggctagtttttaacagcagtttgtGCACTCTAGGCTATATTTTGCAAGAcactgctctaggctagtttttaacaggagatggcgctctaggctagtttttttaaagACTGTGCTATACGCTAGTATTTTCAAACATAAAGCATTCTAGgttactttttaacagcagactccAGGCTAGTTTTTTCAATCAGACACATCTCTGGGCTAGTTTTCAACAACAAACAGTGCTCTTGgtcagtttttaacagcagaccaCACTCTAGGATAGTTTattacagcagatggtgctctatgtttattatttaattgtacaCTTTTACAATTCTCATGAGGAAGAGTGTGCATTGGGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044883 True 1073 lncRNA 0.40 2 37286414 37287626

Neighbor

gene id symbol gene type direction distance location
XLOC_021890 vwa5b1 coding upstream 87524 37185247 ~ 37198890 (+)
XLOC_021889 NA coding upstream 168300 37113287 ~ 37118114 (+)
XLOC_021888 cptp coding upstream 192209 37086159 ~ 37094205 (+)
XLOC_021887 NA coding upstream 248005 37026350 ~ 37038409 (+)
XLOC_021886 CR926464.1 coding upstream 391045 36891729 ~ 36895369 (+)
XLOC_021893 fam43b coding downstream 36336 37323962 ~ 37325961 (+)
XLOC_021894 AL954146.2 coding downstream 151208 37438834 ~ 37438950 (+)
XLOC_021895 AL954146.1 coding downstream 157307 37444933 ~ 37453984 (+)
XLOC_021896 cdaa coding downstream 170976 37458602 ~ 37466323 (+)
XLOC_021897 pink1 coding downstream 179341 37466967 ~ 37480785 (+)
XLOC_021885 NA non-coding upstream 440434 36842632 ~ 36845980 (+)
XLOC_021884 dre-mir-2191 non-coding upstream 496082 36790223 ~ 36790332 (+)
XLOC_021899 AL954146.3 non-coding downstream 205109 37492735 ~ 37492851 (+)
XLOC_021900 NA non-coding downstream 237264 37524890 ~ 37546006 (+)
XLOC_021902 NA non-coding downstream 373052 37660678 ~ 37661442 (+)
XLOC_021903 NA non-coding downstream 434825 37722451 ~ 37724792 (+)

Expression


Co-expression Network