XLOC_021895 (AL954146.1)


Basic Information

Item Value
gene id XLOC_021895
gene name AL954146.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 37444933 ~ 37453984 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043369
GGGGGTCAGGAGGTCGTGCCTTACTCCATCAAGTACCAGGTGTCTCTTCAGGTGGACAGAAAGCATTTTTGTGGAGGAACACTGATTCAGCCGCAGTGGGTGTTGACTGCTGCCCACTGCTGGAGACCGGCCAGTGTGATTCAGGTGGTGCTGAGTGAGCACAATCTCGCTGTAGAAGAGGGATTTGAGCAAGTTTGTACTGTGGCCAAAGTGTTCAGTCATGTTGCCTACAATCCGAAAACTTTTAACAATGACATCATGATTATTAAGCTCACTGCTCCAGCACAGATAAATGCGTATGTTCAGCCAGCGCTGTTGCCCACCGCAGACACACCAGAGTTGGCTGGAGGAAGCAGCTGCACTGTGAGCGGATGGGGAGTGACGCGGCTTTACAACTTCTATCTGTCACCTATTCTGCGCGCGGTGGATGTGGAAATCTTCAGCAGCTGCCAGTTATACTACTACTACAGAGTCAACGACAACATGATTTGTGCTGGCTCACGTTTCGGTGGAAAAGATTCATGCCAGGGAGATTCAGGTGGCCCACTCATTTGTGATGGCTATCTAGAAGGCATTGTGTCGTGGGGAATCGGCTGTGCTCTTCCGTACTATCCTGGCGTCTACACAAAAGTGAGAAACTACAACCGCTGGATCGACTGGATCATCAGCACTGAAAGCTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000038891

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043369 True 681 mRNA 0.51 4 37444933 37453984

Neighbor

gene id symbol gene type direction distance location
XLOC_021894 AL954146.2 coding upstream 5983 37438834 ~ 37438950 (+)
XLOC_021891 NA coding upstream 11704 37227181 ~ 37433229 (+)
XLOC_021893 fam43b coding upstream 118972 37323962 ~ 37325961 (+)
XLOC_021892 NA coding upstream 157307 37286414 ~ 37287626 (+)
XLOC_021890 vwa5b1 coding upstream 246043 37185247 ~ 37198890 (+)
XLOC_021896 cdaa coding downstream 4618 37458602 ~ 37466323 (+)
XLOC_021897 pink1 coding downstream 12983 37466967 ~ 37480785 (+)
XLOC_021898 agmat coding downstream 28743 37482727 ~ 37490249 (+)
XLOC_021899 AL954146.3 coding downstream 38751 37492735 ~ 37492851 (+)
XLOC_021900 NA coding downstream 70906 37524890 ~ 37546006 (+)
XLOC_021889 NA non-coding upstream 326819 37113287 ~ 37118114 (+)
XLOC_021887 NA non-coding upstream 406524 37026350 ~ 37038409 (+)
XLOC_021902 NA non-coding downstream 206694 37660678 ~ 37661442 (+)
XLOC_021903 NA non-coding downstream 268467 37722451 ~ 37724792 (+)
XLOC_021904 NA non-coding downstream 284719 37738703 ~ 37798412 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_01582644_01584095 NA coding CI01000001 null 1582644 ~ 1584440 (-)