XLOC_021902


Basic Information

Item Value
gene id XLOC_021902
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 37660678 ~ 37661442 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044891
AATGTAAATCTGGATTTTGGGGCACTGGAGAAGCACTTTTACCGTTAAGAGGCCATTTTCCACACTGTTTTTGAactgctcttttgtcatatGCAGGCCTGTATGGTTATAGTGACGTTATGCTGACGTGAAAACAAGGAATTTCAAAACAAGACCAAATTTTTTAGCCTAACAAAGAGAAAGTAATCTGATCTGAGTTACTCTTTCTGCTTCAGATTTGTCtctgtaagtcactttagacaaaaacgtttgctaaatgattaaatataaatgtaaatctgGACTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044891 True 286 lncRNA 0.35 2 37660678 37661442

Neighbor

gene id symbol gene type direction distance location
XLOC_021900 NA coding upstream 114672 37524890 ~ 37546006 (+)
XLOC_021899 AL954146.3 coding upstream 167827 37492735 ~ 37492851 (+)
XLOC_021898 agmat coding upstream 170429 37482727 ~ 37490249 (+)
XLOC_021897 pink1 coding upstream 179893 37466967 ~ 37480785 (+)
XLOC_021896 cdaa coding upstream 194355 37458602 ~ 37466323 (+)
XLOC_021903 NA coding downstream 61009 37722451 ~ 37724792 (+)
XLOC_021904 NA coding downstream 77261 37738703 ~ 37798412 (+)
XLOC_021905 irx7 coding downstream 154203 37815645 ~ 37816969 (+)
XLOC_021906 NA coding downstream 180814 37842256 ~ 37926073 (+)
XLOC_021907 NA coding downstream 243028 37904470 ~ 37904696 (+)
XLOC_021894 AL954146.2 non-coding upstream 221728 37438834 ~ 37438950 (+)
XLOC_021891 NA non-coding upstream 227449 37227181 ~ 37433229 (+)
XLOC_021909 NA non-coding downstream 429884 38091326 ~ 38094560 (+)
XLOC_021892 NA non-coding upstream 373052 37286414 ~ 37287626 (+)

Expression


Co-expression Network