XLOC_021907


Basic Information

Item Value
gene id XLOC_021907
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 37904470 ~ 37904696 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044691
catcaattcaacaaggtactggaaatattcctcagatattttggtctatattaacatgacagcatcacacagttgctgcagatttttccgctgcacatccatgatgtgaatctctcgttccaccacattccaaaggtgctctattggattgagaactggtgactgtggaggccttttgagtacggtgaactcattgtcatgtttaagaaaccagtctgagatgattc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044691 True 227 lncRNA 0.41 1 37904470 37904696

Neighbor

gene id symbol gene type direction distance location
XLOC_021905 irx7 coding upstream 87501 37815645 ~ 37816969 (+)
XLOC_021904 NA coding upstream 106058 37738703 ~ 37798412 (+)
XLOC_021903 NA coding upstream 179678 37722451 ~ 37724792 (+)
XLOC_021901 plekhg5b coding upstream 184304 37579107 ~ 37720166 (+)
XLOC_021908 cbln4 coding downstream 50345 37955041 ~ 37974323 (+)
XLOC_021909 NA coding downstream 186630 38091326 ~ 38094560 (+)
XLOC_021910 zgc:112994 coding downstream 255019 38159715 ~ 38182757 (+)
XLOC_021911 znf217 coding downstream 340914 38245610 ~ 38263780 (+)
XLOC_021912 CABZ01070579.1 coding downstream 361467 38266163 ~ 38296789 (+)
XLOC_021902 NA non-coding upstream 243028 37660678 ~ 37661442 (+)
XLOC_021900 NA non-coding upstream 358464 37524890 ~ 37546006 (+)
XLOC_021899 AL954146.3 non-coding upstream 411619 37492735 ~ 37492851 (+)
XLOC_021913 FO904868.1 non-coding downstream 431064 38335760 ~ 38335884 (+)
XLOC_021914 NA non-coding downstream 632872 38537568 ~ 38555295 (+)
XLOC_021918 CABZ01054023.1 non-coding downstream 1278550 39183246 ~ 39184309 (+)

Expression


Co-expression Network