G232835


Basic Information

Item Value
gene id G232835
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19388032 ~ 19388986 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU266200
CTGGTTGCCTCAGGGTCCCATATGACCACATCAGCATCACATCCCTTAGCGATCTTTCCCTTCTGGGGGTAGAAGTTGAAGATTTTCGCTGCATTGCTGCTGGTGACAGCTACAAATCGATTCTCGTCCATTTTTCCGCTATGCTGCGGAAAGTAATTACACAAAATACTGAGTTTCAATATTCTGGATATGAATGACAAACTCCATATTTACTGACATAATTAACCTGACCAAAGGTCAATGCTTAACGGTGCAGTAAGCGATTCAAAGTTTCACTCCAAATATCAAAACGTGTCATTTTTTGCCAGCGTTTTACAATGTTAATTTTTGCAATAGCCTCCGGGTCAACCGATCCTGAGAGAAGGGCAGAAAGAAGTAAGGGAGGAAGAAATAAATGgaaagagaaggacagaaagaaaGCTCGCCTGCTGCTTCATCCACTATGACAGTTTGATTCTGACTGATAAAAACTTCCTTGATGCACATAATAAATAGCATAATATAAATTGTTATCTTCTCTTCTCACAGCAGAAATGTCACTTGTCACCTTTTAAGTCCTACTATAGAACTTACTCAACCGTTTAAAAATAGTACCACTCATTTTTGTAGGACCTGTACCCTTGTCctggacaacaacaaaaacatcacTTTCAGTGGAGAATCTCCACGAGTATGCTTTTTGGTGTAGGGCTATAGGCTTCATCTGTCCGGGAAACTGGCCTATAGTGTGTATAATAAAGAATGATGTGATATGCAGAATGAGAGGCCTAACTGACAACGCCCTTCTCCCAAATGACAGACATCCTGTCCTCCACTCCGTTGACTCCATTGGGGATCTTTGTAAAGTCGTCTTTGCCCAGGGCTTTCTGACACACAGAGAATGTGCAGTTGTCTGTCCCAGTCACGCTGAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266200 True 912 lncRNA 0.53 2 19388032 19388986

Neighbor

gene id symbol gene type direction distance location
LOC110511176 LOC106579058 coding downstream 105664 19065512 ~ 19282368 (-)
LOC110511207 oxr1 coding downstream 363880 18826879 ~ 19024152 (-)
LOC110511312 LOC106605543 coding downstream 590663 18793985 ~ 18797369 (-)
LOC110511352 LOC106605528 coding downstream 681558 18697337 ~ 18706474 (-)
LOC110511375 NA coding downstream 711392 18633399 ~ 18676640 (-)
rims2a LOC106579570 coding upstream 27068 19416054 ~ 19652601 (-)
LOC110512409 LOC106605396 coding upstream 266297 19655283 ~ 19667465 (-)
LOC110512480 flot1 coding upstream 373390 19762376 ~ 19785561 (-)
LOC110512516 LOC106579712 coding upstream 453724 19827342 ~ 19851108 (-)
LOC110512609 LOC106579779 coding upstream 488511 19877497 ~ 19895848 (-)
G232105 LOC106597055 non-coding downstream 154515 19225570 ~ 19233517 (-)
G232065 NA non-coding downstream 257049 19130646 ~ 19130983 (-)
G232064 NA non-coding downstream 258276 19129473 ~ 19129756 (-)
G232063 NA non-coding downstream 261001 19126692 ~ 19127031 (-)
G232062 NA non-coding downstream 266088 19121744 ~ 19121944 (-)
G232802 NA non-coding upstream 15933 19404919 ~ 19408499 (-)
G232873 NA non-coding upstream 82220 19471206 ~ 19471551 (-)
G232883 NA non-coding upstream 96826 19485812 ~ 19486777 (-)
G232898 NA non-coding upstream 120193 19509179 ~ 19510193 (-)
G232921 NA non-coding upstream 164149 19553135 ~ 19554542 (-)
G231652 rn146 other downstream 786157 18599730 ~ 18601875 (-)
LOC110503747 lars2 other downstream 1256978 18093704 ~ 18154474 (-)
LOC110505118 LOC106579600 other downstream 1410123 17975160 ~ 17985544 (-)
G229707 NA other downstream 2339688 17043792 ~ 17048344 (-)
G232980 NA other upstream 259100 19648086 ~ 19648629 (-)
G233052 LOC106605397 other upstream 367218 19756204 ~ 19757908 (-)
G233513 LOC106561082 other upstream 1162797 20551783 ~ 20551997 (-)
glipr2l LOC106605424 other upstream 1259785 20648378 ~ 20652052 (-)

Expression


Co-expression Network