XLOC_021929 (ghrhrl)


Basic Information

Item Value
gene id XLOC_021929
gene name ghrhrl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 40109353 ~ 40126859 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043426
GTGAACTTTCTTCTCTTCTTGAACATTATCAGGATTCTGATGCAGAAACTGAACCCTCGCTTGATCCAGTTCAACAATTCAGACCAGTACAGGCGACTGACCAAGTCCACACTCCTGCTCATCCCTCTCTTCGGCACTCATTACATGATCTTCAGCTTTCTCCCAGACTACTTCAACACGGGCTTGCGGCTCTGCATTGAGCTGTGTCTGGGCTCCTTCCAGGGCCTGATTGTGGCAATTCTCTACTGTTTCCTGAACCAGGAGgtTCAGAATGAGATACGGTTACGATGGCTTCGGTATCAAGAAGGAAGTTATGCTGTCGTCCCCGTCGGAGTGAAAGGAAGTCAGATGGACACTCCAGTTTAGTGTCAAACCAGAAGAAATTCAATCAAACATTTTACCGTATGCATATTGTTTTGCTCTTTTTATATGACAACAATTGGCTTAAAGAGGACCTAATATGCACAtttttacaagatctaaaataagtctctggtATCCCTAAAGTgcgc

Function

symbol description
ghrhrl Predicted to enable G protein-coupled receptor activity; growth factor binding activity; and peptide hormone binding activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and positive regulation of cell population proliferation. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in brain; eye; gut; integument; and pleuroperitoneal region.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway biological_process
GO:0008284 positive regulation of cell population proliferation biological_process
GO:0007165 signal transduction biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0017046 peptide hormone binding molecular_function
GO:0019838 growth factor binding molecular_function
GO:0016520 growth hormone-releasing hormone receptor activity molecular_function
GO:0008528 G protein-coupled peptide receptor activity molecular_function
GO:0004888 transmembrane signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004999 vasoactive intestinal polypeptide receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090211-1 Predicted to enable G protein-coupled receptor activity; growth factor binding activity; and peptide hormone binding activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and positive regulation of cell population proliferation. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in brain; eye; gut; integument; and pleuroperitoneal region.

Ensembl:

ensembl_id ENSDARG00000095788

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043426 True 512 mRNA 0.44 4 40109353 40126859

Neighbor

gene id symbol gene type direction distance location
XLOC_021928 fyco1a coding upstream 66141 39963599 ~ 40043212 (+)
XLOC_021927 si:ch73-217b7.1 coding upstream 168328 39854566 ~ 39941025 (+)
XLOC_021926 NA coding upstream 356389 39752488 ~ 39752964 (+)
XLOC_021925 tmco4 coding upstream 382006 39695827 ~ 39727347 (+)
XLOC_021924 otud3 coding upstream 482672 39611688 ~ 39626681 (+)
XLOC_021930 gpsm2l coding downstream 6277 40133136 ~ 40186528 (+)
XLOC_021931 tent5ab coding downstream 148541 40275400 ~ 40286059 (+)
XLOC_021932 CABZ01067001.1 coding downstream 179385 40306244 ~ 40306371 (+)
XLOC_021933 elovl4b coding downstream 283785 40410644 ~ 40438581 (+)
XLOC_021934 soga3b coding downstream 325298 40452157 ~ 40466398 (+)
XLOC_021918 CABZ01054023.1 non-coding upstream 925044 39183246 ~ 39184309 (+)
XLOC_021914 NA non-coding upstream 1554058 38537568 ~ 38555295 (+)
XLOC_021913 FO904868.1 non-coding upstream 1773469 38335760 ~ 38335884 (+)
XLOC_021912 CABZ01070579.1 non-coding upstream 1812564 38266163 ~ 38296789 (+)
XLOC_021935 CR354556.1 non-coding downstream 339643 40466502 ~ 40472088 (+)
XLOC_021936 CR354556.3 non-coding downstream 350361 40477220 ~ 40480582 (+)
XLOC_021937 NA non-coding downstream 397535 40524394 ~ 40526983 (+)
XLOC_021939 CR405692.1 non-coding downstream 625845 40752704 ~ 40752818 (+)

Expression


Co-expression Network