XLOC_021931 (tent5ab)


Basic Information

Item Value
gene id XLOC_021931
gene name tent5ab
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 40275400 ~ 40286059 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043429
ACTGGGTGCAATCGAGAAGACATGAGCAGCCAGCAGTTTGCACAGAGCAACAGCTGACAATGTGATCACATACACACAGaatGAAGCAACATGTAAAAACTCAAAGCGTCCGCTTCAGTTGAGGAAAGGGGGGGTCTCCTACTGATTAATATTGACTTTCTATATATTTTGTGATCGCAATCATGCATCAATCACTCTGATTCTCACGGCCCCTGGAGAGCCGTGAGAACCCACCGGAGTTCGGCGCTGCGAGCAAAGGCGCAAACAGGACATCTGGGGAGCTTTTACGCGCAGGGGTGAACGCAGCTGGATGCAACACGAATGCACTCATTTCTATAGCTGCATTATTTTCACAGCAACCTCGCATGACATGGAAACAGTGGTATAACATATTCTAATATTATATTCACACTCCAAACACATTTGCAAACACAATGGAGGAGACTCTAAATAACCTGTGCGTGCTGAACTGGGAGCAGGTGAAGCGTCTGGATGCCATCCTTACCGAGTCCATCCCCATTCACGGCAAGTGGAACTTCCCTACCCTGGAGATGAAACCCAGGGACATCGTTAAAGTGGTGCGGTGTCGCATGGAGGAGCGCAAGATCCACGTCCGGGAGGTCCGGCTGAACGGCTCCGCGGCCAGTCACGTTCTCCATGAGGACAGCGGTTTGGGCTACAAGGACCTGGATCTCATATTTTGCGCTGATCTGAAAGGAGAAGTGGAGTTTCAGACTGTCAAAGACATCGTTCTGGATTCCCTCTTGGATTTCCTGCCTGAGGGAGTGAATAAAGAGAAAATTACCCCGGTGACATTAAAGGAGGCTTATGTGCAGAAGATGGTGAAAGTGTGTAACGATTCAGACCGATGGAGTCTAATCTCACTTTCCAACAATAGCGGGAAGAACGTTGAACTGAAGTTTGTGGATTCCCTCCGGCGTCAGTTTGAGTTCAGCGTCGACTCCTTCCAGATCCGCCTGGATTCCCTCCTCCTCTTCTACGAGTGCTCTGAAAACCCCATGGCCGAGACGTTCCACCCTTCCATTGTGGGAGAGAGCGTTTACGGAGACTTCAGCGTAGCCTTGGACCACCTACAACGAAAACTGATCTGCACGCGAAATCCGGAGGAGATCCGCGGCGGTGGCTTGCTGAAATACTGCCACCTACTGGTTCGAGGTTTCCGTGCCGCTTCCGAAGCTGAAATGAAGCTTCTCGAACGCTACATGTGCTCTCGATTCTTCATCGATTTCTCAGACGTGGCGGAGCAGAGGCGAAAACTGGAGTCCTATCTGCAGAATCACTTTGTGGGATTGGAGAACCGGAAGTACGAGTATCTGACCACGCTGCATAGTGTGGTCAATGAAAGTACTGTATGTCTCATGGGACATGAGCGGCGACAAACTCTGAGCCTCATCACCATGCTGGCGGTACGGGTTCTAGCAGAGCAGAACGTGATTCCCAATGTGGCGAACGTCACCTGCTATTATCAGCCTGCGCCGTACATTGCTGATGGCAACTTTAGCAATTATTACATTGCTCAGGTGCAGCCGATGTACGCCTGccaacccacacacacattctcccCGTGGTTGCCCTGCAACTGACCGACTGTTAACTTACCACAACATGTCCAATTAGAGCACTCGCCCAATGAGTCTGTATTTGTGTGCTCCACAGCGTGAGACTTTTCCAATTGGCAGCTCGTTGCAAGGAGACGCTTCGAGCGCGCAGGAAGAGAGAAAGGGAGGGAGAGTGAGGTAACTTGGATCAGTTCCTATCGGGCAGCACGTTCTACCTAGGCTTTCCATGGCTAAGTGCCAGGACTACAAAAAAGCACAACACTGGCTTAGAGGAAACCGCATGGAGACTCTACCGAGAGTAGCATGGACACAAAAGGGACTATCTTTTGCATCTATGTGTGATAGACGTATTTTAAGAATCAAAGAGATCCTGCGAATTGTGTTGAAGTTGCAGTTTCGCAAGGGAAGTAAGAGATACCCAAAAACAGGGGTGTCCatacttgttcctggagggcttcTTTTCTGCAGAGTTAGGCGAATTAAGCACTAATTAAAAATTTCACCAGAGCTTACTGATTAAAAGATTATCCTCTTTCCCGATGaactaaaatg
>TCONS_00043430
aatGAAGCAACATGTAAAAACTCAAAGCGTCCGCTTCAGTTGAGGAAAGGGGGGGTCTCCTACTGATTAATATTGACTTTCTATATATTTTGTGATCGCAATCATGCATCAATCACTCTGATTCTCACGGCCCCTGGAGAGCCGTGAGAACCCACCGGAGTTCGGCGCTGCGAGCAAAGGCGCAAACAGGACATCTGGGGAGCTTTTACGCGCAGGGGTGAACGCAGCTGGATGCAACACGAATGCACTCATTTCTATAGCTGCATTATTTTCACAGCAACCTCGCATGACATGGAAACAGTGGTATAACATATTCTAATATTATATTCACACTCCAAACACATTTGCAAACACAATGGAGGAGACTCTAAATAACCTGTGCGTGCTGAACTGGGAGCAGGTGAAGCGTCTGGATGCCATCCTTACCGAGTCCATCCCCATTCACGGCAAGTGGAACTTCCCTACCCTGGAGATGAAACCCAGGGACATCGTTAAAGTGGTGCGGTGTCGCATGGAGGAGCGCAAGATCCACGTCCGGGAGGTCCGGCTGAACGGCTCCGCGGCCAGTCACGTTCTCCATGAGGACAGCGGTTTGGGCTACAAGGACCTGGATCTCATATTTTGCGCTGATCTGAAAGGAGAAGTGGAGTTTCAGACTGTCAAAGACATCGTTCTGGATTCCCTCTTGGATTTCCTGCCTGAGGGAGTGAATAAAGAGAAAATTACCCCGGTGACATTAAAGGAGGCTTATGTGCAGAAGATGGTGAAAGTGTGTAACGATTCAGACCGATGGAGTCTAATCTCACTTTCCAACAATAGCGGGAAGAACGTTGAACTGAAGTTTGTGGATTCCCTCCGGCGTCAGTTTGAGTTCAGCGTCGACTCCTTCCAGATCCGCCTGGATTCCCTCCTCCTCTTCTACGAGTGCTCTGAAAACCCCATGGCCGAGACGTTCCACCCTTCCATTGTGGGAGAGAGCGTTTACGGAGACTTCAGCGTAGCCTTGGACCACCTACAACGAAAACTGATCTGCACGCGAAATCCGGAGGAGATCCGCGGCGGTGGCTTGCTGAAATACTGCCACCTACTGGTTCGAGGTTTCCGTGCCGCTTCCGAAGCTGAAATGAAGCTTCTCGAACGCTACATGTGCTCTCGATTCTTCATCGATTTCTCAGACGTGGCGGAGCAGAGGCGAAAACTGGAGTCCTATCTGCAGAATCACTTTGTGGGATTGGAGAACCGGAAGTACGAGTATCTGACCACGCTGCATAGTGTGGTCAATGAAAGTACTGTATGTCTCATGGGACATGAGCGGCGACAAACTCTGAGCCTCATCACCATGCTGGCGGTACGGGTTCTAGCAGAGCAGAACGTGATTCCCAATGTGGCGAACGTCACCTGCTATTATCAGCCTGCGCCGTACATTGCTGATGGCAACTTTAGCAATTATTACATTGCTCAGGTGCAGCCGATGTACGCCTGccaacccacacacacattctcccCGTGGTTGCCCTGCAACTGACCGACTGTTAACTTACCACAACATGTCCAATTAGAGCACTCGCCCAATGAGTCTGTATTTGTGTGCTCCACAGCGTGAGACTTTTCCAATTGGCAGCTCGTTGCAAGGAGACGCTTCGAGCGCGCAGGAAGAGAGAAAGGGAGGGAGAGTGAGGTAACTTGGATCAGTTCCTATCGGGCAGCACGTTCTACCTAGGCTTTCCATGGCTAAGTGCCAGGACTACAAAAAAGCACAACACTGGCTTAGAGGAAACCGCATGGAGACTCTACCGAGAGTAGCATGGACACAAAAGGGACTATCTTTTGCATCTATGTGTGATAGACGTATTTTAAGAATCAAAGAGATCCTGCGAATTGTGTTGAAGTTGCAGTTTCGCAAGGGAAGTAAGAGATACCCAAAAACAGGGGTGTCCatacttgttcctggagggcttcTTTTCTGCAGAGTTAGGCGAATTAAGCACTAATTAAAAATTTCACCAGAGCTTACTGATTAAAAGATTATCCTCTTTCCCGATGaactaaaatgataaaaaaaaaacaataaatagtaaCTAGAACGAAATCTGCTcaacaaaaaaaattagtaaCTCTCAggaaacaacaacaattattaaaagtcattttgatcccggacgagcccccgttTATTTTACGAATGCCAGATTTAAACTGCTTGTTTAGACTTTGGAgtcaaaaatacaattttttatttttattttttaaggacaTCTAATCATGAACTACCATCTGTTTCTTATAAGGTGACAATTTGGTATGGATGTAGTGAGAATTAGGTGTCCTATTAGAACGTGCCACAGGCAAGATTCATCTATTGGGATACAAGAGTTTTTCACAGCCCCATTTAAGTAACAAGACTCAGTTTTAAAGTGCTCATTTAGGCAGGGCCACACGAGTCAAAAATTTTCAATTTATTGAGAAGCAAAAAATCAAGTGTGTTAACAAAATATAATGGCAATAGAAAGAATAAACTAATAACAAACTAGTAACAAGTATATCGAATGTATCTAGTCAACAAACAACCAAAACTCAACAGCATAACCAACATTGGACAAGGCACGCACAGCACTTTCACTCTCAAGGCAGCAGTACACAGTAGGATGCATATAAAGATTCTCAACAAGTATGGGTCTAGCTCATGACTGGCTAAAAGACTTGCATTTGAGCTGGTCGGAGCAAAAAATCAGCAGCTCAGTGTCCCTCCAGGAGGAAGATTGGACACCTTTGCCTTTAGTGCCTTAAACTGAAAATCAAAGTCACTCTGTTAACGACCCCTAAGTATGTCGGTTAAGACGTCCTTTAGCAGTAACATTCAATGCAATCTCAATGCAGTTCCtaacttttagatttagtggctaaGTAATGTGTGtgatctcattcgtacattttagtacgatttggtCATGACCCAACGAGGGGTAGGGTTGGGGGTGGGGTTTGGGGGCATGCctacttttaaaaatcatgttttcgTATGGATGAAATCGTATAAACTATCCACTTTTTAATCTGAAacatagttacatttcctcatgagaacAGGCTGGTAACATATGACAGAAGGTAGTGCACAATAGCAAATGAATTTTGAAGATCATCCAATCATGAACTACCATCTGTTAACTTGTCAATTTGGTACCACTACAGTGAGAATTGTGGTGTCTACTAGAAAGCGACACGGACAAGGCATTCGTATATTAGAGTACGAGATGGGAGATTTTTCACAGCTTCTTGTCTCATTTGAACTGACCTTAATGTACTGTTGGCTCAGCGTTGGCTTAGCTCAGATTAAATCGTCCGGGGCAATGCCATTACATCTAAGGCACAGAGGTAAAACAGGTCAAGGCTGAACAGGAAGAGAATTAACGAAAGTTGTTTAAGAGcaaattgttgttgttatatccAGGTTACCTGGCGTCTTTCTTCGGGCCTAATTATCACACAGCCACCAAATCCAGAGATTATACCTTTGACACATCTGACCTGCATAACCTGGGGGATTAAGACCAGAAGAGATGCAGCATTGCAAAGCGGAAAAGCATATACAAGAGAAAGAGACGAAGAAGAACATATACCAAAGATATTTGTGAGATTCCTCAAGATTGTGAACCAACACTTACGTACTTGACGTAAGAGCATCTACATACAGTCCATACTTAAATAACATTGCAAGTCTGGATTTAGAGCTCTGGCAtttcctaaagggatagttcactcaaaatgtttatttactcacAAATATTCACCCTCAAATGGCTATAAAcgtttatgagtttttttcttctgagaTTTTTTGGAGAAAGCTAAACATTGATAACCACTGACATCCTtagtgggaaaaacaaacactacacaGCAAATCCTCCAGTGTTAAATAAACACTGTCAGTGTTACATAATATGTGATGGCAGTGTTGGTGTAATCTTGTTTTAACACTCAAAGTAAGACTATATAAACACTGCATTTAATACTGGAGGTTTTGCTTTGTATCAAAGTCCACGGTTAACAGTTTCAAGCTTACTTCGAAATATCTTTAGAAGAAGAATATTTTGTGTCGTTTTTTTAgcgtgaactatctctttaagcctTGTTCCAAGTGCTTTCCGAAAGCCAGTTCTTTCTTTGCATCTACACATTGTGTAGTGTGGCATAGACTGCCTGTTAGTATTCCATTTGGGgaaaatccagcctgatctcacgaggtaGCGTAACTGTTTTAAGTTTTGTTAGTTTactggctaattcgtattaatttgtACGAGTTTAGTCGTCCGAAAAtctacgattttaaaaaagaggtgtggcatcaaaccccacccctaaacaaaATTGTCATTggaggataagcaaatcgtattaaattgtacgaatgagatgaTGTATGAATTTATACgaagtagccactaaatcaaaaagttacgaattgccgtgagattgtgttgggcaATCTGTTCAATAAAAATTATGTGCACTCTTCCTAGTaagcttttattgttttaatagatgtctaatagacatctaaacatagtcatcttggctaaaacaaggctaaaaagATGTCTAAGAAAAGGCCAAagctagactagtcatcaaaataaacagaaaagaatgactacacatacaaagtctgtctaatctgtctatttgacgactagtctagtttagGGCTATTCTTAGACGTTTGCTACATTTTCACTGAAAGCCCAAGTTTTGCCTTGTTTAGCctcatttagatgtctattagaagTCTGCTGGGTTCAAATTACAAAAACGGGACACCCAATGATCACATGCACACAATGGCTGTCCCAAGTCTGACTGCAAGCTGGGACAAGGCCAGAGATTTACTAAATGGCTAAATACACCCCAACTGATCATACAAAAATGGACGTTTTCTTTCCATATGctcactcatatatatatatatatatatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatata

Function

symbol description
tent5ab Predicted to enable RNA adenylyltransferase activity. Predicted to be involved in mRNA stabilization. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma; osteoarthritis; and osteogenesis imperfecta type 18. Orthologous to human TENT5A (terminal nucleotidyltransferase 5A).

GO:

id name namespace
GO:0048255 mRNA stabilization biological_process
GO:0005575 cellular_component cellular_component
GO:1990817 RNA adenylyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-071004-35 Predicted to enable RNA adenylyltransferase activity. Predicted to be involved in mRNA stabilization. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma; osteoarthritis; and osteogenesis imperfecta type 18. Orthologous to human TENT5A (terminal nucleotidyltransferase 5A).

Ensembl:

ensembl_id ENSDARG00000054641

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043429 False 2132 mRNA 0.49 3 40275400 40283071
TCONS_00043430 True 5041 mRNA 0.42 2 40275601 40286059

Neighbor

gene id symbol gene type direction distance location
XLOC_021930 gpsm2l coding upstream 88872 40133136 ~ 40186528 (+)
XLOC_021929 ghrhrl coding upstream 148541 40109353 ~ 40126859 (+)
XLOC_021928 fyco1a coding upstream 232188 39963599 ~ 40043212 (+)
XLOC_021927 si:ch73-217b7.1 coding upstream 334375 39854566 ~ 39941025 (+)
XLOC_021926 NA coding upstream 522436 39752488 ~ 39752964 (+)
XLOC_021932 CABZ01067001.1 coding downstream 20185 40306244 ~ 40306371 (+)
XLOC_021933 elovl4b coding downstream 124585 40410644 ~ 40438581 (+)
XLOC_021934 soga3b coding downstream 166098 40452157 ~ 40466398 (+)
XLOC_021935 CR354556.1 coding downstream 180443 40466502 ~ 40472088 (+)
XLOC_021936 CR354556.3 coding downstream 191161 40477220 ~ 40480582 (+)
XLOC_021918 CABZ01054023.1 non-coding upstream 1091091 39183246 ~ 39184309 (+)
XLOC_021914 NA non-coding upstream 1720105 38537568 ~ 38555295 (+)
XLOC_021913 FO904868.1 non-coding upstream 1939516 38335760 ~ 38335884 (+)
XLOC_021912 CABZ01070579.1 non-coding upstream 1978611 38266163 ~ 38296789 (+)
XLOC_021937 NA non-coding downstream 238335 40524394 ~ 40526983 (+)
XLOC_021939 CR405692.1 non-coding downstream 466645 40752704 ~ 40752818 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_00192545_00195828 FAM46A.L, FAM46AB, FAM46A, FAM46AA coding CI01000001 null 191931 ~ 196831 (-)