Gene
RNA
| Item | Value |
|---|---|
| gene id | G259281 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 41769253 ~ 41769738 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU295139 | True | 486 | lncRNA | 0.40 | 1 | 41769253 | 41769738 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519968 | LOC106586018 | coding | downstream | 1364218 | 40396378 ~ 40405035 (-) |
| LOC118944520 | NA | coding | downstream | 1486377 | 40279614 ~ 40282876 (-) |
| LOC110519967 | shox | coding | downstream | 1643990 | 40111206 ~ 40125263 (-) |
| LOC110519961 | NA | coding | downstream | 2108674 | 39646055 ~ 39660579 (-) |
| LOC110519957 | LOC106586009 | coding | downstream | 2125958 | 39631499 ~ 39643295 (-) |
| LOC110519979 | LOC106586061 | coding | upstream | 473838 | 42243576 ~ 42291605 (-) |
| col6a3 | LOC106598405 | coding | upstream | 521990 | 42291728 ~ 42329627 (-) |
| LOC110519978 | LOC106586070 | coding | upstream | 559901 | 42329639 ~ 42334795 (-) |
| LOC118936375 | LOC106581667 | coding | upstream | 565169 | 42334907 ~ 42339654 (-) |
| LOC110519982 | LOC106586070 | coding | upstream | 570172 | 42339910 ~ 42364268 (-) |
| G259255 | NA | non-coding | downstream | 35092 | 41733754 ~ 41734161 (-) |
| G259247 | NA | non-coding | downstream | 42019 | 41726998 ~ 41727234 (-) |
| G259054 | NA | non-coding | downstream | 217877 | 41509257 ~ 41551376 (-) |
| G259059 | NA | non-coding | downstream | 228556 | 41466985 ~ 41540697 (-) |
| G258136 | NA | non-coding | downstream | 330508 | 41438429 ~ 41438745 (-) |
| G259307 | NA | non-coding | upstream | 30848 | 41800586 ~ 41801082 (-) |
| G259328 | NA | non-coding | upstream | 71267 | 41841005 ~ 41841272 (-) |
| G259344 | NA | non-coding | upstream | 135553 | 41905291 ~ 41918305 (-) |
| G259496 | NA | non-coding | upstream | 320106 | 42089844 ~ 42123312 (-) |
| G259539 | NA | non-coding | upstream | 370331 | 42140069 ~ 42162167 (-) |
| G259259 | sdpr | other | downstream | 1665 | 41763817 ~ 41767588 (-) |
| G256632 | NA | other | downstream | 1433813 | 40335210 ~ 40335440 (-) |
| G256616 | NA | other | downstream | 1446355 | 40322506 ~ 40322898 (-) |
| G256016 | LOC106581772 | other | downstream | 1950273 | 39818648 ~ 39818980 (-) |
| G255911 | NA | other | downstream | 2123510 | 39644571 ~ 39645743 (-) |
| G259576 | LOC106599288 | other | upstream | 515892 | 42285630 ~ 42327995 (-) |
| G259579 | LOC106586070 | other | upstream | 520521 | 42290259 ~ 42319385 (-) |
| G261580 | NA | other | upstream | 2219786 | 43989524 ~ 44031505 (-) |
| G262993 | NA | other | upstream | 3240434 | 45010172 ~ 45012249 (-) |
