XLOC_022092


Basic Information

Item Value
gene id XLOC_022092
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 2728104 ~ 2729009 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044939
CAGACGAgatAGACATAAGCTGACCGCAGGACAGCATCTGACCGTACAGACACAACTCCATCACCCGCAGAGCCGCTGTTCAGTCCAAGTGTCCTTCCCTCAGACTTTGCTACCAAGAAGATTTTTCCTTCAAGAAGACGCAAACAACACGAGATCCAATGTAAAGATCACTTCCTCGATAACGGATACAACACGGGTCCACTTCTTGGCGCTTCTCAGCTCTTCTCCCTATTGATGAGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044939 True 240 lncRNA 0.49 2 2728104 2729009

Neighbor

gene id symbol gene type direction distance location
XLOC_022091 snai1b coding downstream 214804 2502181 ~ 2513300 (-)
XLOC_022090 PRSS35 coding downstream 279870 2446978 ~ 2448234 (-)
XLOC_022089 NA coding downstream 306398 2420534 ~ 2421706 (-)
XLOC_022088 NA coding downstream 470643 2245449 ~ 2257461 (-)
XLOC_022087 NA coding downstream 559927 2163390 ~ 2168177 (-)
XLOC_022093 NA coding upstream 113390 2842399 ~ 2844254 (-)
XLOC_022094 zhx3 coding upstream 143846 2872855 ~ 2901167 (-)
XLOC_022095 NA coding upstream 231209 2960218 ~ 2992107 (-)
XLOC_022096 AL954726.1 coding upstream 326972 3055981 ~ 3056096 (-)
XLOC_022097 mafba coding upstream 676656 3405665 ~ 3409140 (-)
XLOC_022079 NA non-coding downstream 1087797 1513309 ~ 1640307 (-)
XLOC_022077 CR376840.1 non-coding downstream 1509603 1218382 ~ 1218501 (-)
XLOC_022098 NA non-coding upstream 721989 3450998 ~ 3451379 (-)
XLOC_022102 NA non-coding upstream 999081 3728090 ~ 3730606 (-)

Expression


Co-expression Network