Gene
RNA
| Item | Value |
|---|---|
| gene id | G268317 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49504027 ~ 49504226 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU304859 | True | 200 | lncRNA | 0.54 | 1 | 49504027 | 49504226 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944672 | NA | coding | downstream | 1002 | 49494001 ~ 49503025 (-) |
| dlx2a | dlx2 | coding | downstream | 25910 | 49475978 ~ 49478117 (-) |
| LOC110520101 | LOC106586223 | coding | downstream | 90914 | 49390493 ~ 49413113 (-) |
| LOC110520100 | LOC106586220 | coding | downstream | 146579 | 49303033 ~ 49357448 (-) |
| ccdc173 | ccdc173 | coding | downstream | 428857 | 49055465 ~ 49075170 (-) |
| LOC110520112 | LOC106586230 | coding | upstream | 59615 | 49563841 ~ 49608114 (-) |
| sp3a | LOC106586237 | coding | upstream | 290431 | 49794657 ~ 49802027 (-) |
| LOC110520118 | LOC106586238 | coding | upstream | 310545 | 49814771 ~ 49862076 (-) |
| LOC110520119 | NA | coding | upstream | 362961 | 49867187 ~ 49871681 (-) |
| LOC110520120 | LOC106586242 | coding | upstream | 374884 | 49879110 ~ 49895110 (-) |
| G268313 | NA | non-coding | downstream | 3583 | 49500235 ~ 49500444 (-) |
| G268312 | NA | non-coding | downstream | 5701 | 49497880 ~ 49498326 (-) |
| G268299 | NA | non-coding | downstream | 28328 | 49475335 ~ 49475699 (-) |
| G268293 | NA | non-coding | downstream | 37831 | 49465888 ~ 49466196 (-) |
| G268286 | NA | non-coding | downstream | 44220 | 49459599 ~ 49459807 (-) |
| G268320 | NA | non-coding | upstream | 6722 | 49510948 ~ 49511446 (-) |
| G268328 | NA | non-coding | upstream | 21196 | 49525422 ~ 49525705 (-) |
| G268329 | NA | non-coding | upstream | 21724 | 49525950 ~ 49526176 (-) |
| G268330 | NA | non-coding | upstream | 23707 | 49527933 ~ 49528246 (-) |
| G268332 | NA | non-coding | upstream | 26005 | 49530231 ~ 49530464 (-) |
| G268310 | NA | other | downstream | 8224 | 49495477 ~ 49495803 (-) |
| LOC110505248 | gcg | other | downstream | 1470725 | 48032036 ~ 48033434 (-) |
| G265988 | NA | other | downstream | 1904212 | 47599218 ~ 47599815 (-) |
| G263274 | NA | other | downstream | 3966485 | 45536332 ~ 45537542 (-) |
| LOC110520121 | LOC106581751 | other | upstream | 395947 | 49895327 ~ 49901575 (-) |
| LOC110520139 | LOC106586251 | other | upstream | 935979 | 50440201 ~ 50442930 (-) |
| LOC110520160 | LOC106586095 | other | upstream | 1624214 | 51126600 ~ 51130404 (-) |
