G268470


Basic Information

Item Value
gene id G268470
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49922997 ~ 49930662 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU305043
CACTGTCAGCGCTATCGCTAATGAAACATTCCGCTTATGAAACATTCCTTGTAACTTTAATGCGCAGGGAGCTGCAGCTGTGAGGACTTCTCTCTGGTCATGCGGGGGAGTGTTACACAGGTCGCACGGTTGCATAACCACAGAACactgagagagatggacagagtggTCGCAACAAATGCAGGTATTAATACCAGGCCGCTATGATCTGTGAACTTCTCAACCAACGCTCTCTGTAATCCCTCCCTGCTATCCTTCAGCAGTTTCACGAAGAGACATCTAAAGGCAGTAGAGTTTATCTGATAACTGGGATTAGATAAGTTTTAAATCTGTGGACAATGTATTCGATTGCTTTTTGGAGAGGATTAATGTTGCTAGCGTATGCTGATCGCCATCCGTTGTTCAGTCAGAGACAGAACATCGTTGTTCTAATATTAGACATGGACAAAGATAGTAGACGTTTGACCAGAGAATGGTCAGTCTGAGTTTACATTTGCTGGTTATTTAACATATTTAATGAGATCGACAAGTCATTCTTATCAAGGTTGACTGGTACAGTTTCTCTAATATAGCTAAATGAGCATGTTTCGAGTTGATGAAAGGTCATCGTTGTTCaggagagagatactgtatatccCTATACCCCACATACCAGTGTAGTGTGGAttaacacacagtacagtacctatgCATCCCATAAGCTGCGTGGATGTGTCCTTGTATAACCCTGCTGTGTGGAATCCACTGTGGATGGCAAAGTGGGATAGCAGCACAGCATACATCACTGTCGAGGCAACAGCCAAAATCACAGCCAGGTAATGTATTTGTCTTGGAGGAATACGGTGTGAATGGTCTCTCTTTTTTGCCAGGCAAGCAAAAAGGGTGAGATTTTCAGCAACAGTACCATTTCCCGGGGAAAGGTTGCCCAAGCCACAGCTGTAATGATATCAGTACTGAACTGTAGTCTTCCCCTCTATGGAAGCTCTCAATGTGGGGGGATGCGTAATGAGCAGGTACAGTAGGGATGGTTCCATTCTGTTGCCAGATTTCAGTGGATTGTTCTCTTGCCACTCAGTCAATTAGCCATTAGGCCATAGTTGATTCCATCCATCACAGTTCCTAATGAGGACAAATTGATAAGCCCCAATTTAGAGTGGTACTAGTCTGGGTACCACTCTGTTTAGCAATCATTGCACTCATGTCATGATAAACACTCTTTGCCatctttaatttaactaggcaagtcatttaagaacaaattagtatttacaatgacggcctaccctggccaaaccctaacaacgctgggccaattgtgcacttccctatgggactcccaatcacggctgattgtgatacagcctggaatcaaaccagggtctgtagtgacacgtctagcactgagatgcagtgccttagactgctacgCCACTCAGAAGCCCAACATATCACATGGAGTACAAGGAGTTGAATGGAGTCACATGGAGTACAAggagactagacgtaacatagtataTGTAAAtcagggacactcaaattagtatgatatgttacgtttggtatggttacctaagacaaacagttgaagtcggaagtttacatacaccttcgccaaatacatttaaactcagtttttcacaattcctagtaaaaatcccctgtcttaggtcagttaggctcaccactttgtcttaagaatgtgaaatgtcagaataatagtagagagaacgatttatttcagcttttatttatttcgtcacattcccagtgggtcagaagtttacatacagggctttgtgatggccactccaataccttgactttgttgtctttaagccattttgccacaactttggaagtatgcttgtggtcattgtccatttgcgaccaagctttaacttcctgactgatgtcttgagatgttgcttttgatgccatctattttgaagtgcaccagtccctcctgcagcaaagcatccccacaacaggatgctgccacccccgtgcttcacggctgggatggtgttcttcagcttgcaagcctccccctttttcctccaaacataacgatggtcttcatggccattatgaccatttttgtttcatctgaccagaggatatttctccaaaaggtacgatctttgttcccatgtgcagttgcaaaccgtagtctggcttttttatggtggttttggagcagtggcttcttccttgctgagcgacctttcaggttgtgtcgatataggactcattttactgtggatatagatacctttgtacctgtttcctccagcgtcttcacaaggtcctttgctgttgttctgggattgatttgcactttttgtatgttcatctctaggagacagaacgcgtctccttcctgagcagtaggacggctgcgtggtcccatggtgtttgtacttgcatactattgtttgtacagacgaatgTGGTACCATCAGGTGTtctgaaattgctcccaaggatgaaccagacttgtggaggtctacaattttttttctgaggcattggcttatttttttacattttcccatggggtcaagcaaagaagcactgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacaatattttctggaatttttccgagctgtttaaaggcacagtcaacttagtgtatgtaaacttctgatccactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaatgacttgtgtcatgcatgaagtagatgtcctaacttgCAAAAAcaacagtttgttaacaagaaatttgtggagtggttgaaaaacgagttttaatgactccaacctaagtgtatgtaaacttccgacttcaactgtatggttacttaaggcaaaacgAAAGTAAGGTcgttggtcggggtggatgggtgggcatATAACACTAACGTCTAGCAACTCAAAGGTTGccagtttgaatctcatcacagacaactttagctaattagcaactacttagcatgttagctcacattaaccctttaacctaactcctgaacttgagcctaaccttaaccctaaccccaacacctAATCTAGCTAATTAAGCAACCTAGCCAcatagctagaattcgtaacatatcatacatttagaAAATTTGTGACATATTGTACGTTTTACATATTGTATGTTTAGCAATTTCCTAAGCTATAATACAacttgtaacatactgtatcatgtgAAAAATGGTGATGGACAtctacaaattaatacataccatacgaaacttaacatatcatactaagtGGAGTGTCTCAGTTTACGTACTAAATAATACGAAATTGTCACGtccactcccattccccctcTCCAGCGTCGCCGGTCTGCTAACCActggtcctggcaacccatcctgacaaacacctggcaaccttcattacgcacacctgcgcctcattaggcacacctggacttTGTCACATCCCTGATTACTGCCCCTTTATATAGCACTCCATTGTTGTCACCAACCAGGCAATATTGTTTATGTTTCCATGTTTAGATGCGTTTCTTGTTTTTTATCGTTCAATGGTCTTCATCATTAAACTCACTAACtgcacttgcttcctgactcaTTGCATCTACGTTACAGAATATTGCCTCCCAGAATAGAAGCAGCAGCCAACCGAGACAGATTCACGGCGAACAGGAAGACCTACTTCGCCAACACCACGATCAGCTGGTGCAACTGGGGACGGCAATGGATGAGGTCCTCTGCATTCTTCAATGTCTAGATCTTCCCCAAGGGGCATCACTCCCAACGAGCGGAGGATCCTCTACCATGAGTCGACCCAGCAAGCCAGTACCCCAGCCTATTCAGCAGTCTACCTAGATCAGCGATGCCCGTTTGTCCCTTTCAGACAAATATGACAAGACTCCATCCAAATGCCGTGGCTTCCTCTTCCAGTGCTTCCTCTATTTTGCCCATCAAAGGGGAGGCCTCACCTCCAAGTTTGCCATGATTATTTTTCCAGTTGACCGGGCGGCGTTGGAATGGGCCACGgccgtctgggagagaggagaggaggagctgggTTTCTATGGGAgattcatggctctgttcagagTAGTCTTCAATCGTCCACCGGAGGGCAGAGAGGGGTGTGAGCGCCTACTGGAACTTCGTCAGGAGGACCAGACCGCTGCGGAGTACACCCTCACCTTTCGTACAGTGGCAGCAGCCAGCTGATGGAATGAGCCGGCGCTTCTCACCTTATTCAAGGTCCAGACGGAGCTAGCATGCCCAGACGACACCCTCTCATTGGACACACTCATCGCGATGGCCATCCGTCTGGATAACCTCCTTTGTGAGCGTCAGCACCCTCATcgcatctctccctccttcgttGACCCATCTGAGTCAGTGCCTGAACCCATGGATGTAGCGGCCACACCTCTCCCTGCAGCTGAGCGACGCCGTCGGAGACAACTGGGCTCTGTCCCTATTGTGGCCAGGAGGGACACCAGCTTCAACGGTGTCCGCTACGTTCTAACCCGAGAGTCACTAGAGCAGAGGGATGGTCCAGTGATCATCCGTCTCCTGGGGTAGGTGTGAGTATCCCATCATCTTCACTCTCCACCAAGGCTTCTTAGTACAGATTTCACTAGCGGGCTGTCCCTCATGTGTTGTTTCCACAGCTCTAGTGGACTCCGGAGCTGCGGGGAATTTTATTGACCAGGCCCTTGCCTCCTCCCTGAACATGACATCATACCCGCTCTCCTCTCCGTTTCCGGTTCAAGCACTGGATAACCGACTACTGTGGTTGCCTTCCAGGCTGACATCCCGGAGGTTTACCAGGATCTCCGTGAGGTTTTCTTCAAGACTTGCACCACCTGCACCTCCTCATTGCCCTTGGGACTGTGCCATTCACCTGCTAACAGACTCTGCTCCTCCGCGCAGCCACATCTACCCCCTGTCGGTGTTTGAAACCAAGGCTACGAGGAGTACATCCAGGAGGCTCGTCAACAGGGTTTCATCCGCTCATCCACCTCCACTGCTTCGGCTGGTTTCTTTTTTGTGGCCAAGAAGGAGTGGCGTCTTTGTCCGTGTACTGACTAGAGAGGTCTCAATGCCATCACCACCAAGTACCGCTACCCCCTCCCGTTTGTGCCGGCCGCCATTGAACAGCTCCGCGGGACACAGTTGTTTACCAATCTGGACCTGCGGAGTGCATACAATTTGATCCGCATCCAGGAGGGGGGATGAACTGAAGACGGCCTTCAGTACGGTGTCTGGACACTACGAGTACTTGGTGATGTCTTATGGTTTAGCCAATGCTCCCATCGGTGTTCCAGGCATTCTTGAATGAGGTGTTTTGAGACATGCTTGGGCGCCAGGTGGTTGTGTATGTCGACGACATCCTGATCTACTTGGCCACCTTGGAGGAGCACATCGTCAACGTCAGGGTAGTACTGGGACGCATCCTGGAAAACCATCTGTACTTGAAAGCTTAGAAGTTCCATCAGGTCGCCGTCTCCTTCTTGGGATATCGGATCAGCCTACATAGAGTGGTTATGGAGGAATGGAAGGTAGATGCGGTCAGGTCAAGGCCAATCTCAAACAGTATAAAGGGACTACAATGGTTTTTGGGGTTTGCCAACTTTTACCGCCGATTTCAGcaggtcttccggcactatggcctTCTGGAGGATATCGTCTCTGACCGTGGTCCCCAATTAACGTCACGTGTATGGAGAGCCTTTGTGGAGAAGCTGGGAGTCACTGTCATCCTCAAATCCAGATACAGCCCTAGGTACAACAGGCAGGTGGAGAGGAccaaccaggagctggggaggttcctgaggagtcactgTCAGGACTGGCAGAGGGAGTGGGCCTGGTTTCTTCCCTGGGCGTAGTACGCCCAGAAGTCCCTTTGTCACTCCTCCACTGGGTTGTCTCCCgtctagtgtctcctgttgtaCCAGCCGGCTCTGGCTCTGTGGACCCCGAGCCAGACCAAAACTCCTGCGGTGGATGAGTGGTTCCGGCACGAAGGTAATGTTTGGGACGCTGCCCACGTGAGGCGTCAGAATGAGCAGGCGGACCGAAACCACAATGAGGCACCCGTTTTTCATCCTGGTGATCGCGTCTGGCTCGCCACCAAGAACCTACCCCTATGCCTGCCCTACCGGAAGCTGAGCCCCCGGTTTGTGTGGCCATTTAAAGTCCTCCGGAGTGTCAATTAGTTAACTTACCGATTACAGCTTCCCAATGACTACCGGATCTCACCCTCTTTTCACGTTTCCTTCCTCAGGCATgtggttcctggtcccctggcTGATGCCGTCCCCCATGACAGGAGTGGTGTTGGGTTCTGGTGGACGACTTTCTAAATCCCAACATCATCCGAGATTTCCCCCTTCGCTGTCAGGACCGGGCCGCTCCTCGTCCTTGGGACCATCCTCCTGGCTGGTGttccccctctctggcgctctaCGTCGCCAGTCTCCTAACCACGGTCCTGGCAACTCATCCtgatgcacacctggcaaccttcaTTACGCAGACCTGCGCCTCATTAGGACttcatcacctccctgattacttCCCCTTTATACACTGCCTTCGGaaatactttttccacattttgttacatctcagacatctacacacaataccctataatgaaaaagcgaaaacaggttttgagaaatgtttgcaaatttaaaaagaaagaatgaaggaaataccttatttacataactattcagaacctttgctatgagactcgaaattaagctcaggtgcatcctttttccattgatcatccttgagatgtttctacaacttgattggagtacacctgtggtaaattcaattgattggacatgatttggaaaggcacacacctgtctatataaggtcccacagttgacagtgcatgtactgtatgtcagagcaaaaacaagccatgaggtcgaaggctttgtccgtagagctcagagacaggattgtgtcgatggtcactctgacagagctctagagtttctctgtggagatgggagaacctgaGTACTGctgcaaagggtctgagtactgagtaaagggtctgaatacttatgtaactgtgttatttcagttttattttaataaattagcaaaaatgtatagaaaactgtttttgctttgtcgttatggggtattgtgtagttttatgagaaaacaacaacaattgaatacattttagaaaaaaggctgtaaagtaacaaaatgtggaaaaagtcaaggggtctgaatactttccgaatgcaccgtataacACTCCGTCATTATCACCCACCAGGCAATATTGTTTACGTTTCCATGTTCAGACGCTGTTCTTGTTTTGTATCGTTCAATGTTCTTCGTCATTAAACTCACTAACTACATTTGCTTCATGACTCCCTGCGTCTACGTTACAGAAATGCTCCGAGACCAGGTTGGGTTCCCAGGCTAGAGTTGTACAGCTCTTTATGAAACACTGTATTGAGAACTGTGGACTATCAGACAGCCACTCTCTTAGGGTTGTTAGGACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107710542

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305043 True 7637 lncRNA 0.47 2 49922997 49930662

Neighbor

gene id symbol gene type direction distance location
LOC110520122 LOC106586243 coding downstream 2669 49905433 ~ 49920328 (-)
LOC110520121 LOC106581751 coding downstream 21422 49895327 ~ 49901575 (-)
LOC110520120 LOC106586242 coding downstream 27887 49879110 ~ 49895110 (-)
LOC110520119 NA coding downstream 51316 49867187 ~ 49871681 (-)
LOC110520118 LOC106586238 coding downstream 60921 49814771 ~ 49862076 (-)
atf2 atf2 coding upstream 31805 49962467 ~ 49978892 (-)
LOC110520125 atp5g3 coding upstream 48534 49979196 ~ 49981870 (-)
lnpa LOC100194569 coding upstream 153438 50084100 ~ 50099697 (-)
evx2 evx2a coding upstream 189007 50119669 ~ 50124620 (-)
nfe2l2a LOC106586247 coding upstream 394447 50325109 ~ 50332906 (-)
G268502 NA non-coding downstream 116327 49806408 ~ 49806670 (-)
G268501 NA non-coding downstream 117818 49804977 ~ 49805179 (-)
G268467 NA non-coding downstream 128380 49791748 ~ 49794617 (-)
G268462 NA non-coding downstream 184547 49738222 ~ 49738450 (-)
G268548 NA non-coding upstream 10214 49940876 ~ 49945765 (-)
G268560 NA non-coding upstream 30253 49960915 ~ 49961213 (-)
G268673 NA non-coding upstream 115264 50045926 ~ 50046290 (-)
G268700 NA non-coding upstream 147122 50077784 ~ 50077987 (-)
G268701 NA non-coding upstream 147457 50078119 ~ 50078323 (-)
LOC110520112 LOC106586230 other downstream 355523 49563841 ~ 49608114 (-)
LOC118944672 NA other downstream 420026 49494001 ~ 49503025 (-)
G268310 NA other downstream 427194 49495477 ~ 49495803 (-)
LOC110520139 LOC106586251 other upstream 509543 50440201 ~ 50442930 (-)
LOC110520160 LOC106586095 other upstream 1197778 51126600 ~ 51130404 (-)
fgf9 NA other upstream 1542662 51471899 ~ 51478510 (-)
il1rl1 il1rl1 other upstream 1666737 51596933 ~ 51619476 (-)
LOC110520182 NA other upstream 2777521 52693956 ~ 52708816 (-)

Expression


Co-expression Network