Gene
RNA
| Item | Value |
|---|---|
| gene id | G273523 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53766360 ~ 53766580 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU310545 | True | 221 | lncRNA | 0.38 | 1 | 53766360 | 53766580 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520198 | LOC106586311 | coding | downstream | 19491 | 53671765 ~ 53746869 (-) |
| ubxd2 | ubxd2 | coding | downstream | 102382 | 53661100 ~ 53663978 (-) |
| LOC110520195 | LOC106586316 | coding | downstream | 203922 | 53537677 ~ 53562438 (-) |
| LOC110520193 | LOC106586318 | coding | downstream | 372042 | 53384541 ~ 53394318 (-) |
| zeb2a | LOC106586328 | coding | downstream | 890590 | 52827783 ~ 52875770 (-) |
| rab3gap1 | LOC106586310 | coding | upstream | 50531 | 53817111 ~ 53864985 (-) |
| LOC110520203 | LOC106586308 | coding | upstream | 117118 | 53883698 ~ 53893788 (-) |
| LOC110520207 | LOC106586304 | coding | upstream | 415092 | 54181672 ~ 54191829 (-) |
| LOC110520212 | NA | coding | upstream | 658978 | 54425558 ~ 54429214 (-) |
| LOC110520213 | ube2f | coding | upstream | 737484 | 54504064 ~ 54594080 (-) |
| G273493 | LOC106586314 | non-coding | downstream | 114409 | 53645933 ~ 53651951 (-) |
| G273464 | NA | non-coding | downstream | 163993 | 53602078 ~ 53602367 (-) |
| G273454 | NA | non-coding | downstream | 174680 | 53591439 ~ 53591680 (-) |
| G273298 | NA | non-coding | downstream | 369063 | 53397079 ~ 53397297 (-) |
| G272832 | NA | non-coding | downstream | 390839 | 53373540 ~ 53375521 (-) |
| G273584 | NA | non-coding | upstream | 102129 | 53868709 ~ 53869460 (-) |
| G273686 | NA | non-coding | upstream | 251874 | 54018454 ~ 54025320 (-) |
| G273731 | NA | non-coding | upstream | 313199 | 54079779 ~ 54079990 (-) |
| G273735 | NA | non-coding | upstream | 317789 | 54084369 ~ 54084590 (-) |
| G273743 | NA | non-coding | upstream | 328292 | 54094872 ~ 54095187 (-) |
| G272713 | LOC106586324 | other | downstream | 515276 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 1057544 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 2166130 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 2292221 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 2637050 | 51126600 ~ 51130404 (-) |
| G274344 | LOC106586294 | other | upstream | 913338 | 54679918 ~ 54682805 (-) |
| LOC110520227 | plekhm3 | other | upstream | 1336914 | 55068639 ~ 55122013 (-) |
| G275250 | NA | other | upstream | 1643563 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 3504202 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 3636404 | 57402984 ~ 57403575 (-) |
