G276907


Basic Information

Item Value
gene id G276907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 56671494 ~ 56672592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU314381
ctgtcctatagctaTAACCCCCATTTTGAATTTAACACACAAAGTAATTCTACAGCACTTCTTTCCAATGTGAAGTGAGTGCCTCTCTCATTCAGTTGGCCAACAGGAGGAGCGGGGAGCTTTTCTTACCGTGCCCATTTGATGAGGTAGGGCAGGTGGTTGAGCAGACTGAAGGTGTAGAAGGAGTAGCGGATGATCTCTGTAATGGTCCAGGCCGATACGAAGAGCAGGACACTGTCTTCACTCTGGACCTCTCGGACGCTGTGTGTCACAGCCCAGGTGAGGAAGACCCGAGACAACACCTGGAACCCCGTTAGAACCACAGAGGATGGAACGATCCCTGGAGCAGGAGAACACAGCATGATCATCACATTAGAAGATATGTACTGTATCACCTCAAAATACAGCTTTACCACTTCACAACAGTGATACTGAGCAAAATACATGATGAGAAGAAAAGACAAGACATCATATTTTAAATTTGTGCAAAAGT

Function

NR:

description
PHS1 protein

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU314381 True 493 lncRNA 0.46 2 56671494 56672592

Neighbor

gene id symbol gene type direction distance location
LOC110520265 LOC106586394 coding downstream 3903 56652369 ~ 56667591 (-)
LOC110520263 LOC106586393 coding downstream 20541 56600804 ~ 56650953 (-)
arl5a arl5a coding downstream 70921 56589557 ~ 56600573 (-)
LOC110520260 NA coding downstream 92844 56495151 ~ 56578650 (-)
LOC110520254 LOC106586385 coding downstream 622349 56047811 ~ 56049145 (-)
LOC110520269 LOC106586397 coding upstream 159806 56832398 ~ 56844653 (-)
LOC110520270 LOC106586417 coding upstream 194617 56867209 ~ 56917413 (-)
slc49a4 dirc2 coding upstream 470843 57143435 ~ 57206958 (-)
LOC110520276 LOC106586419 coding upstream 560041 57232633 ~ 57260239 (-)
si:dkey-91i10.3 LOC106586420 coding upstream 599881 57270782 ~ 57297762 (-)
G276844 LOC106586392 non-coding downstream 185822 56484375 ~ 56485672 (-)
G276843 LOC106586392 non-coding downstream 187779 56483429 ~ 56483715 (-)
G276840 NA non-coding downstream 191012 56480259 ~ 56480482 (-)
G276835 NA non-coding downstream 201783 56468912 ~ 56469711 (-)
G276829 tsg6 non-coding downstream 209698 56453003 ~ 56461796 (-)
G276969 NA non-coding upstream 146053 56818645 ~ 56819892 (-)
G277110 NA non-coding upstream 295444 56968036 ~ 57046855 (-)
G277168 NA non-coding upstream 381393 57053985 ~ 57054282 (-)
G277245 NA non-coding upstream 516072 57188664 ~ 57189944 (-)
G275250 NA other downstream 1260007 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 1552282 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 1988689 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 3420410 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 3962678 52693956 ~ 52708816 (-)
G277673 LOC106586423 other upstream 730392 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 911794 57584386 ~ 57589183 (-)
G284018 NA other upstream 6041983 62714575 ~ 62715177 (-)
G286522 NA other upstream 8296957 64969549 ~ 64970755 (-)

Expression


Co-expression Network