G277245


Basic Information

Item Value
gene id G277245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57188664 ~ 57189944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU314730
GAACAGTAAAGCCTTATTGAGCTGTGTATCTAACAGCCTATGATCTATTCAGAAACAGATCCCCAAGTCACCAGCAGGTGTCACTCATTGCATTGcgtttgctgctgctgctgctcacagGTCTATGGCTGCACAGTTCGAGATCTGAGACATGGGGTTTGTGTTATTTTTACCCATGCTGCTGCCATCTActtgtctcacacacacataaatattcAATTTCCATCTCTCTTGAAACGTCAAGAGTGTGGGTGCTGCTGGGGCTACGACGGTGATTTTAGATACGACCAATGGTAAGAGGTTCTGCTGATCTGTTGAGAGGTCTGTGGGAATAAGAGGAGATGAacggggagaggagaagacagggtagaagaggggagaggtgagggaagTAAAGGAAAGAGGAGCAGATAGGAGAGAAAAGgaaagcaggaggagaggagctgagagaagaggagaggaagggagctgagaggaggagaggagaagatagaaAATGAGAGGAAGGAAgctgagagaggacaggagaagatagaaaaggagaagaaggaagctgagaggaggacaggagaagagaggagaagaggtgaaGATAGAAAATGAGAGGTAGGAAGCTGAGAGgagaaagaaaaggagaagaaggaagctgagaggaggacaggagctgggagaagagaggaggagaagaggtgaagatagaaaaggagaggaaggaagctgagaggaggacaggagcgGAGAAGAGGGGAAGATAGAAAAGGAGAAGAAGGAAGAGCTGAGAGGAGAAGAGCGGAGAAGAAGAGGTGAAGATAGAAAAGGAGAGAATCTGAAAGGAGCTGAGTGAGTTCAAGTGCATCCCAGCCAGCGATCAAACAGAGTCTTTGATTTTCATCCCCTCCTAAAGATTGATTTAGAAACAGGATGGCTCCCCTGACAGCACACACTAGATCATATTTTTAAAGAGGGAGAACAATCGTTTCATGTTCGATGGGCGTATTTCTTCACCATATGCTCTGGAGGGTAAACTTTGTTCAGTTTGGAGCTCATTTCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314730 True 1054 lncRNA 0.47 3 57188664 57189944

Neighbor

gene id symbol gene type direction distance location
LOC110520270 LOC106586417 coding downstream 271251 56867209 ~ 56917413 (-)
LOC110520269 LOC106586397 coding downstream 344011 56832398 ~ 56844653 (-)
LOC110520265 LOC106586394 coding downstream 521073 56652369 ~ 56667591 (-)
LOC110520263 LOC106586393 coding downstream 537711 56600804 ~ 56650953 (-)
arl5a arl5a coding downstream 588091 56589557 ~ 56600573 (-)
LOC110520276 LOC106586419 coding upstream 42689 57232633 ~ 57260239 (-)
si:dkey-91i10.3 LOC106586420 coding upstream 82529 57270782 ~ 57297762 (-)
LOC110520278 LOC106586422 coding upstream 131294 57321238 ~ 57330396 (-)
LOC118963713 NA coding upstream 142674 57332568 ~ 57336298 (-)
LOC110505369 LOC106586424 coding upstream 220037 57409981 ~ 57414314 (-)
G277168 NA non-coding downstream 134382 57053985 ~ 57054282 (-)
G277110 NA non-coding downstream 141809 56968036 ~ 57046855 (-)
G276969 NA non-coding downstream 368772 56818645 ~ 56819892 (-)
G276907 NA non-coding downstream 516072 56671494 ~ 56672592 (-)
G277259 NA non-coding upstream 18989 57208933 ~ 57209198 (-)
G277576 NA non-coding upstream 30643 57220587 ~ 57222617 (-)
G277604 NA non-coding upstream 76992 57266936 ~ 57267196 (-)
G277647 NA non-coding upstream 159628 57349572 ~ 57349815 (-)
G275250 NA other downstream 1777177 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2069452 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 2505859 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 3937580 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 4479848 52693956 ~ 52708816 (-)
G277673 LOC106586423 other upstream 213040 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 394442 57584386 ~ 57589183 (-)
G284018 NA other upstream 5524631 62714575 ~ 62715177 (-)
G286522 NA other upstream 7779605 64969549 ~ 64970755 (-)

Expression


Co-expression Network