Gene
RNA
| Item | Value |
|---|---|
| gene id | G277604 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57266936 ~ 57267196 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU315112 | True | 261 | lncRNA | 0.48 | 1 | 57266936 | 57267196 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520276 | LOC106586419 | coding | downstream | 6697 | 57232633 ~ 57260239 (-) |
| slc49a4 | dirc2 | coding | downstream | 59978 | 57143435 ~ 57206958 (-) |
| LOC110520270 | LOC106586417 | coding | downstream | 349523 | 56867209 ~ 56917413 (-) |
| LOC110520269 | LOC106586397 | coding | downstream | 422283 | 56832398 ~ 56844653 (-) |
| LOC110520265 | LOC106586394 | coding | downstream | 599345 | 56652369 ~ 56667591 (-) |
| si:dkey-91i10.3 | LOC106586420 | coding | upstream | 5277 | 57270782 ~ 57297762 (-) |
| LOC110520278 | LOC106586422 | coding | upstream | 54042 | 57321238 ~ 57330396 (-) |
| LOC118963713 | NA | coding | upstream | 65422 | 57332568 ~ 57336298 (-) |
| LOC110505369 | LOC106586424 | coding | upstream | 142785 | 57409981 ~ 57414314 (-) |
| LOC110520281 | LOC106586425 | coding | upstream | 148886 | 57416082 ~ 57427344 (-) |
| G277576 | NA | non-coding | downstream | 44319 | 57220587 ~ 57222617 (-) |
| G277259 | NA | non-coding | downstream | 57738 | 57208933 ~ 57209198 (-) |
| G277245 | NA | non-coding | downstream | 76992 | 57188664 ~ 57189944 (-) |
| G277168 | NA | non-coding | downstream | 212654 | 57053985 ~ 57054282 (-) |
| G277110 | NA | non-coding | downstream | 220081 | 56968036 ~ 57046855 (-) |
| G277647 | NA | non-coding | upstream | 82376 | 57349572 ~ 57349815 (-) |
| G277648 | NA | non-coding | upstream | 83199 | 57350395 ~ 57350781 (-) |
| G277649 | NA | non-coding | upstream | 84185 | 57351381 ~ 57351609 (-) |
| G277653 | NA | non-coding | upstream | 91952 | 57359148 ~ 57359527 (-) |
| G275250 | NA | other | downstream | 1855449 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 2147724 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 2584131 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 4015852 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 4558120 | 52693956 ~ 52708816 (-) |
| G277673 | LOC106586423 | other | upstream | 135788 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 317190 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 5447379 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 7702353 | 64969549 ~ 64970755 (-) |
