G277808



Basic Information


Item Value
gene id G277808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 57591700 ~ 57591993 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU315341
ctgtcattctgcccctggacaggcagttcacccactgttcctaggccgtcattgaaaataagaatttgttcttaactgacttgcctagttaaataaaggtaaaaatacaaTATTGCTCTGAACAAACATGACCGCAATGTGATATCTGCAAATTATTGAAATAATTCATCAATGCACACATTTGATCAGTAGGCTAGTTTGGGAAATGTGAGTCAGATTTGACCCACTTCATTCAATGAGATGGGACAGTCATTCACTACAAATAACATTATGTGGCTGTAACCTAACTGCAGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU315341 True 294 lncRNA 0.38 1 57591700 57591993

Neighbor


gene id symbol gene type direction distance location
LOC118964377 NA coding downstream 109980 57481596 ~ 57481720 (-)
LOC110520281 LOC106586425 coding downstream 164356 57416082 ~ 57427344 (-)
LOC110505369 LOC106586424 coding downstream 177386 57409981 ~ 57414314 (-)
LOC118963713 NA coding downstream 255402 57332568 ~ 57336298 (-)
LOC110520278 LOC106586422 coding downstream 261304 57321238 ~ 57330396 (-)
LOC110520284 LOC106586429 coding upstream 6553 57595333 ~ 57609026 (-)
LOC110520285 LOC106586430 coding upstream 40147 57632140 ~ 57734917 (-)
LOC110520286 LOC106586431 coding upstream 317614 57909607 ~ 57919306 (-)
si:dkey-3d4.3 LOC106586432 coding upstream 342077 57934070 ~ 57943312 (-)
LOC118964362 NA coding upstream 910564 58502557 ~ 58502699 (-)
G277807 NA non-coding downstream 152 57591292 ~ 57591548 (-)
G277750 NA non-coding downstream 462 57590678 ~ 57591238 (-)
G277803 NA non-coding downstream 13344 57577973 ~ 57578356 (-)
G277801 NA non-coding downstream 14666 57576828 ~ 57577034 (-)
G277800 NA non-coding downstream 15140 57576354 ~ 57576560 (-)
G277966 NA non-coding upstream 192555 57784548 ~ 57784824 (-)
G277968 NA non-coding upstream 193439 57785432 ~ 57785661 (-)
G277974 NA non-coding upstream 197822 57789815 ~ 57790145 (-)
G277749 LOC106586429 other downstream 2517 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 188125 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 293938 57270782 ~ 57297762 (-)
G275250 NA other downstream 2180213 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 2472488 55068639 ~ 55122013 (-)
G284018 NA other upstream 5122582 62714575 ~ 62715177 (-)
G286522 NA other upstream 7377556 64969549 ~ 64970755 (-)
G286580 marco other upstream 7422266 65014259 ~ 65029736 (-)
G286638 NA other upstream 7462707 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 7643187 65235180 ~ 65235908 (-)

Expression



Co-expression Network