G279328


Basic Information

Item Value
gene id G279328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 58719550 ~ 58720039 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU316920
ggatgacactgggccaactgtgcgccgccctatgggactcccaatcacagccagttgtgatacagcctggaatcgaaccagggtctgtagtgacacctctagcactgagatgcagtgccttacactgctgcgccactcaggagcccagcAAAACATTGAACAATTGGAGGTTTTAGTAACATTCTATCACTTTCTTTTTTGGGGTAAGTTAATCAACTATAGCAGTACAGAGTTTTATCTAAAGTGTGGCTGTAATTACTTATGTTTCCTAGATTAGTTCTTAGTTTATGTATTGGTGCCAGTAGGCCCATTTGACACATCAACATACTTGAATCTAGTGATGCATTGCCAATCCCTCATAACAATGTTCACAGACAGTTCTTCATACAGTATCTGTTCTGTAGCCATCAGCAGAGCAACAGAACTGACTCAAGCATATTCCATATGTCTACTAATATCATAGAGGCACATACTGTAGTAGGCCTATAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU316920 True 490 lncRNA 0.43 1 58719550 58720039

Neighbor

gene id symbol gene type direction distance location
LOC118964362 NA coding downstream 216851 58502557 ~ 58502699 (-)
si:dkey-3d4.3 LOC106586432 coding downstream 776238 57934070 ~ 57943312 (-)
LOC110520286 LOC106586431 coding downstream 800244 57909607 ~ 57919306 (-)
LOC110520285 LOC106586430 coding downstream 984633 57632140 ~ 57734917 (-)
LOC110520284 LOC106586429 coding downstream 1110524 57595333 ~ 57609026 (-)
LOC110520288 LOC106586437 coding upstream 23862 58743901 ~ 58761841 (-)
LOC110520289 LOC106586438 coding upstream 46388 58766427 ~ 58774628 (-)
LOC110520290 myo1b coding upstream 55592 58775631 ~ 58932254 (-)
vwc2l LOC106586444 coding upstream 395377 59115416 ~ 59144836 (-)
cps1 cps1 coding upstream 1445939 60165978 ~ 60253769 (-)
G279318 NA non-coding downstream 8771 58710524 ~ 58710779 (-)
G279269 NA non-coding downstream 18226 58700486 ~ 58701324 (-)
G279243 NA non-coding downstream 31352 58687983 ~ 58688198 (-)
G279231 NA non-coding downstream 42506 58676747 ~ 58677044 (-)
G279071 NA non-coding downstream 146311 58572979 ~ 58573239 (-)
G279337 NA non-coding upstream 13603 58733642 ~ 58733934 (-)
G279338 NA non-coding upstream 13961 58734000 ~ 58734235 (-)
G279344 NA non-coding upstream 20441 58740480 ~ 58740696 (-)
G279501 NA non-coding upstream 85131 58805170 ~ 58805443 (-)
G279581 NA non-coding upstream 232480 58952519 ~ 58952867 (-)
G277749 LOC106586429 other downstream 1130367 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 1315975 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 1421788 57270782 ~ 57297762 (-)
G275250 NA other downstream 3308063 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 3600338 55068639 ~ 55122013 (-)
G284018 NA other upstream 3994536 62714575 ~ 62715177 (-)
G286522 NA other upstream 6249510 64969549 ~ 64970755 (-)
G286580 marco other upstream 6294220 65014259 ~ 65029736 (-)
G286638 NA other upstream 6334661 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 6515141 65235180 ~ 65235908 (-)

Expression


Co-expression Network