Gene
RNA
| Item | Value |
|---|---|
| gene id | G279501 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 58805170 ~ 58805443 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU317109 | True | 250 | lncRNA | 0.41 | 2 | 58805170 | 58805443 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520289 | LOC106586438 | coding | downstream | 30542 | 58766427 ~ 58774628 (-) |
| LOC110520288 | LOC106586437 | coding | downstream | 43329 | 58743901 ~ 58761841 (-) |
| LOC118964362 | NA | coding | downstream | 302471 | 58502557 ~ 58502699 (-) |
| si:dkey-3d4.3 | LOC106586432 | coding | downstream | 861858 | 57934070 ~ 57943312 (-) |
| LOC110520286 | LOC106586431 | coding | downstream | 885864 | 57909607 ~ 57919306 (-) |
| vwc2l | LOC106586444 | coding | upstream | 309973 | 59115416 ~ 59144836 (-) |
| cps1 | cps1 | coding | upstream | 1360535 | 60165978 ~ 60253769 (-) |
| map2 | LOC106586448 | coding | upstream | 1486960 | 60292403 ~ 60416303 (-) |
| kansl1l | NA | coding | upstream | 1616198 | 60421641 ~ 60463431 (-) |
| LOC118944680 | tas2r8 | coding | upstream | 1692131 | 60497574 ~ 60523192 (-) |
| G279344 | NA | non-coding | downstream | 64474 | 58740480 ~ 58740696 (-) |
| G279338 | NA | non-coding | downstream | 70935 | 58734000 ~ 58734235 (-) |
| G279337 | NA | non-coding | downstream | 71236 | 58733642 ~ 58733934 (-) |
| G279328 | NA | non-coding | downstream | 85131 | 58719550 ~ 58720039 (-) |
| G279318 | NA | non-coding | downstream | 94391 | 58710524 ~ 58710779 (-) |
| G279581 | NA | non-coding | upstream | 147076 | 58952519 ~ 58952867 (-) |
| G279700 | NA | non-coding | upstream | 164735 | 58970178 ~ 58970954 (-) |
| G279856 | NA | non-coding | upstream | 366504 | 59171947 ~ 59172147 (-) |
| G279905 | NA | non-coding | upstream | 401888 | 59207331 ~ 59207762 (-) |
| G280128 | NA | non-coding | upstream | 566588 | 59372031 ~ 59372427 (-) |
| G277749 | LOC106586429 | other | downstream | 1215987 | 57584386 ~ 57589183 (-) |
| G277673 | LOC106586423 | other | downstream | 1401595 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 1507408 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 3393683 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 3685958 | 55068639 ~ 55122013 (-) |
| G284018 | NA | other | upstream | 3909132 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 6164106 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 6208816 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 6249257 | 65054700 ~ 65075985 (-) |
| G286953 | LOC107579696 | other | upstream | 6429737 | 65235180 ~ 65235908 (-) |
