G279700


Basic Information

Item Value
gene id G279700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 58970178 ~ 58970954 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU317323
GTTAGGCACTTTGTTAAGCACTTTGTTAGGCACTTTGTTAGGCACTTTGTTAGGCACTTTGTTAAGCACTTTGTTAGGCACTTTGTTAGGCACTTTGTTAGGCACTTTGTTAGGCACTTTGTTGAGTACTTTGTTAGGCACTTTGTTAGGCACTTTGTTAGGCACTTTGTTAAGCACTTTGTTGAGTACTTTGTTAAGCACTTTGTTAGGCACTTTGTTAAGCACTTTGTTAAGCACTTTGTTAGGCACTTTGTTAGGCACTTTGTTGAGCACTTTGTTAAGCACTTTGTTAGGCATTTTGTTAGGCACTTTGTTAGGCACTTTGTTAAGCACTTTGTTAGGTACTTTGTTAAGCACCTTGTTAGGCACTTTGGTTAGCACTTTGGTTAGCACTTTGATAAGCACTTTGTTAGGTACTTTGGTGAGCACTTtgataagcactttgtgacaactaaTAATAGTAAATGCCATTGAGTAGAGgctttatccaaagtgacttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317323 True 501 lncRNA 0.38 2 58970178 58970954

Neighbor

gene id symbol gene type direction distance location
LOC110520290 myo1b coding downstream 37924 58775631 ~ 58932254 (-)
LOC110520289 LOC106586438 coding downstream 195550 58766427 ~ 58774628 (-)
LOC110520288 LOC106586437 coding downstream 208337 58743901 ~ 58761841 (-)
LOC118964362 NA coding downstream 467479 58502557 ~ 58502699 (-)
si:dkey-3d4.3 LOC106586432 coding downstream 1026866 57934070 ~ 57943312 (-)
vwc2l LOC106586444 coding upstream 144462 59115416 ~ 59144836 (-)
cps1 cps1 coding upstream 1195024 60165978 ~ 60253769 (-)
map2 LOC106586448 coding upstream 1321449 60292403 ~ 60416303 (-)
kansl1l NA coding upstream 1450687 60421641 ~ 60463431 (-)
LOC118944680 tas2r8 coding upstream 1526620 60497574 ~ 60523192 (-)
G279581 NA non-coding downstream 17311 58952519 ~ 58952867 (-)
G279501 NA non-coding downstream 164735 58805170 ~ 58805443 (-)
G279344 NA non-coding downstream 229482 58740480 ~ 58740696 (-)
G279338 NA non-coding downstream 235943 58734000 ~ 58734235 (-)
G279337 NA non-coding downstream 236244 58733642 ~ 58733934 (-)
G279856 NA non-coding upstream 200993 59171947 ~ 59172147 (-)
G279905 NA non-coding upstream 236377 59207331 ~ 59207762 (-)
G280128 NA non-coding upstream 401077 59372031 ~ 59372427 (-)
G280139 NA non-coding upstream 411064 59382018 ~ 59382228 (-)
G280170 NA non-coding upstream 442007 59412961 ~ 59413164 (-)
G277749 LOC106586429 other downstream 1380995 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 1566603 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 1672416 57270782 ~ 57297762 (-)
G275250 NA other downstream 3558691 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 3850966 55068639 ~ 55122013 (-)
G284018 NA other upstream 3743621 62714575 ~ 62715177 (-)
G286522 NA other upstream 5998595 64969549 ~ 64970755 (-)
G286580 marco other upstream 6043305 65014259 ~ 65029736 (-)
G286638 NA other upstream 6083746 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 6264226 65235180 ~ 65235908 (-)

Expression


Co-expression Network