G279905


Basic Information

Item Value
gene id G279905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 59207331 ~ 59207762 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU317533
tgttgaatATACGGACgctcatcagttattctgtgctctgacACATTCAGACCAGAGTGCTCtaaaatcagagtagatagctaGAGCAAATTCACCAATCgtaacattctattgaaatggttacttgcatagtggagtcttttgttaagacatgtagttagctagctaggtaaacaatgaaccataaacccaactcatgatgttactagCTTGCataaatctgcaggtagctaacaaTCTGGTTCAATGttagctcaaatcaaatcaaattttatttgtcacatacacatgggtagcagatgttaatgcgagtgtagggaaatgcttgtgcttctagttccgaccatgcagtaatatctaacaagtaatctaacaatttcacaacaactaccttatacacacaagtgtaaaggaatgaataagaatatgtac

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317533 True 432 lncRNA 0.36 1 59207331 59207762

Neighbor

gene id symbol gene type direction distance location
vwc2l LOC106586444 coding downstream 62495 59115416 ~ 59144836 (-)
LOC110520290 myo1b coding downstream 275077 58775631 ~ 58932254 (-)
LOC110520289 LOC106586438 coding downstream 432703 58766427 ~ 58774628 (-)
LOC110520288 LOC106586437 coding downstream 445490 58743901 ~ 58761841 (-)
LOC118964362 NA coding downstream 704632 58502557 ~ 58502699 (-)
cps1 cps1 coding upstream 958216 60165978 ~ 60253769 (-)
map2 LOC106586448 coding upstream 1084641 60292403 ~ 60416303 (-)
kansl1l NA coding upstream 1213879 60421641 ~ 60463431 (-)
LOC118944680 tas2r8 coding upstream 1289812 60497574 ~ 60523192 (-)
heg1 LOC106586449 coding upstream 1337342 60545104 ~ 60560296 (-)
G279856 NA non-coding downstream 35184 59171947 ~ 59172147 (-)
G279700 NA non-coding downstream 236377 58970178 ~ 58970954 (-)
G279581 NA non-coding downstream 254464 58952519 ~ 58952867 (-)
G279501 NA non-coding downstream 401888 58805170 ~ 58805443 (-)
G279344 NA non-coding downstream 466635 58740480 ~ 58740696 (-)
G280128 NA non-coding upstream 164269 59372031 ~ 59372427 (-)
G280139 NA non-coding upstream 174256 59382018 ~ 59382228 (-)
G280170 NA non-coding upstream 205199 59412961 ~ 59413164 (-)
G280605 NA non-coding upstream 377235 59584997 ~ 59585152 (-)
G280647 NA non-coding upstream 430866 59638628 ~ 59640995 (-)
G277749 LOC106586429 other downstream 1618148 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 1803756 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 1909569 57270782 ~ 57297762 (-)
G275250 NA other downstream 3795844 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 4088119 55068639 ~ 55122013 (-)
G284018 NA other upstream 3506813 62714575 ~ 62715177 (-)
G286522 NA other upstream 5761787 64969549 ~ 64970755 (-)
G286580 marco other upstream 5806497 65014259 ~ 65029736 (-)
G286638 NA other upstream 5846938 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 6027418 65235180 ~ 65235908 (-)

Expression


Co-expression Network