XLOC_022209 (nkain4)


Basic Information

Item Value
gene id XLOC_022209
gene name nkain4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 14265122 ~ 14403939 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043843
CACACACCCGtgtctttctctcacacacatacacacactcctcCCGCCGCCCGTGTTCGCGTTCACACTTCCACGCGTGTTTCACTGAGTGCCGCCGCTGGAAACAATGGGAACGGAGGCGCTTTGTGTCGGACAGAGACTGACGCGCTTCACTGTGTTTGTTTAGGAGTTTATGCTGAAAGACTCATATATTCAGGATCTCATTATCTCGCTTTAACACAATGGGCTGCTGCAGCGGACGGTGCACCCTTATATTTCTGTGCACGTTTCAGTTGaTGGTGGCGTTAGAGAGGCAGGTCTTCGATTTCTTGGGGTACCAGTGGGCTCCCATCCTTGCCAACTTCTTCCACATCCTGGTGGTCATCCTGGGCCTGTTCGGCACCATTCAATACAGACCTCGCTACATTGTGGTGtaTACAGTTTGGACGGCGCTGTGGGTCGCCTGGAACGTCTTCATTATCTGCTTCTACCTGGAGGTTGGAGGTCTTTCAAAGGACAGCGACCTCCTGACCTTCAACATCTCTGCGCATCACTCCTGGTGGAGCGAGCATGGGCCGGGCTGCATCCGAAGAGAGATCCCAGCCAGTGGAGAGCGCGAAGCTGACACACAGTCCTACATCTCCATCATGGGCTGCCTGCTGGAGTACCAGTACATAGAAGTGCTGCACAGCGGCTGCCAGATCCTCATCTCTCTGCTGGGCTTCATCTACGCCTGCTACGTCATCAGTGTCATCACAGAGGAGGAGGACAGCTTTGATTTTATTGGTGGATTTGACCCATTCCCACTCTACCATGTCAATGAGAAACCATCTCATCTTCTGTTAAAGCCTGTGCCTCAGTCTTCGTAAATGAAAAAGTGTGATGAAGAGCATCTGCTCTGGCCATTCCTCCTCTCAGTTCCTCTCTCCTAAAACACTGTCTCATCATCCTCAATCAGCCCTTCCTGCTTTAGACAGAATTGGAGAACCAGCTCCCTGATTTCCAGCTCTGGACAAAACGCAGCCGCTCCGACACACTCTTCCACAGTGGCTGCAAAGCATATCTAAACAGAAAGCTCTAGTGTTTTGAAGGgtgttgtgcgtgtgtgtggtccATGCTTTTGAGTTTGTTCACATGTTGTGGTTCACTGAGTTCCAgctctgtatgtatgtgtgtgtgtgtgtgtgaggtcatTGTGTGCTGTTTACTTTCACTCAGGATTTGCACAATAAAAACGGA

Function

symbol description
nkain4 Predicted to be involved in regulation of sodium ion transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human NKAIN4 (sodium/potassium transporting ATPase interacting 4).

GO:

id name namespace
GO:0002028 regulation of sodium ion transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080204-60 Predicted to be involved in regulation of sodium ion transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human NKAIN4 (sodium/potassium transporting ATPase interacting 4).

Ensembl:

ensembl_id ENSDARG00000062699

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043843 True 1218 mRNA 0.51 7 14265122 14403939

Neighbor

gene id symbol gene type direction distance location
XLOC_022208 ddx23 coding downstream 48616 14193547 ~ 14216506 (-)
XLOC_022206 adcy6a coding downstream 206037 13940958 ~ 14059085 (-)
XLOC_022207 BX897727.1 coding downstream 275640 13989364 ~ 13989482 (-)
XLOC_022205 g6pd coding downstream 387224 13842982 ~ 13877898 (-)
XLOC_022204 naa10 coding downstream 424689 13832347 ~ 13840433 (-)
XLOC_022210 CR388373.2 coding upstream 3949 14407888 ~ 14415213 (-)
XLOC_022211 NA coding upstream 170559 14574498 ~ 14583539 (-)
XLOC_022212 NA coding upstream 331396 14735335 ~ 14738386 (-)
XLOC_022213 gss coding upstream 339148 14743087 ~ 14769523 (-)
XLOC_022214 sla2 coding upstream 404282 14808221 ~ 14990921 (-)
XLOC_022203 NA non-coding downstream 440930 13818507 ~ 13824192 (-)
XLOC_022202 NA non-coding downstream 455525 13806359 ~ 13809597 (-)
XLOC_022201 CU929459.1 non-coding downstream 550622 13714386 ~ 13714500 (-)
XLOC_022200 CR391935.2 non-coding downstream 629215 13635793 ~ 13635907 (-)
XLOC_022217 BX537335.1 non-coding upstream 703909 15107848 ~ 15107962 (-)
XLOC_022219 NA non-coding upstream 1028474 15432413 ~ 15563597 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000021_01735408_01735712 NA coding CI01000021 null 1735263 ~ 1735712 (-)
mexican tetra (Astyanax mexicanus) G273999 nkain4,LOC107693550,LOC107601334,LOC107594068,LOC107696930 unknown NW_019172238.1 APWO02001836.1 340416 ~ 434904 (-)