G286522


Basic Information

Item Value
gene id G286522
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64969549 ~ 64970755 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU324819
gcataaagtattcagaccctttgctatgagactcaaaattgagctcaggtgcatcctgtttccattgatcatccttctatttctacaacttggggtcaacctgtggtaaattcaattgattggacatgatctggaaaggcacacacctgtctatctaaggtcccaaagttgacagtgtatgtcagagcaaaaaccaagccattaggtcgaaggatttgtccgtagagctctgagacaggattgtgtcgaggcacagatctggggaagagtaacaacacatttctgcagcattgaaggtgccTAAGAACACAGTTGCCAAAATCATTCtaaaattgaagaagtttggaaccaccaaggctctttcATAGAGCTGGGCatcgggccaaactgagcaatcggggagatgggccttggtccgggaggtgaccaagaacccaatggacactctgacagagctccagagttcctctatggagatgggagaactttccagaaggacaaccatctctgcagcactcaatcaACCAGATCTTTATGCTAGAGtagtcagacggaagccacacctcagtaaaaaaggcacatgacagcccacttggagttcgccaaaagccacctaaaggactctcagactatgagaaacaagattctctggtctgatgaagccaagattgctctttggcctgaataccaagtgtcacgtctggaggaaacctggcaccatccctacggtgaagtatggtggtggcagcatcatgctgtggggatatttttcagctgcagggaatgggagactagtcaagattaagggaaagatgaacagagcaaagtacagagagatccttgatgaaaacctgctccagagtgctcaggacctcagactggggcaaaggttcaccttccaacaggacaaccacccAACCACACAACCagtacaacgcaggagtgactttgggacaagactctgaatgtccttgagcggctCAGCCAGAAAcaggacttgaaccagatcaaacatctttggagagaccggaaaatagctgtgtagggacgccatccaacctgacagagtttaagaggatctgcagagaagaaggggagatactccccaaatacaggtgtgccaagcttgtagcatcaaacccaagaagactcaaggatgttatcgctgcaaaaggtgcttcaacaaagtactcagtaaatggtctga

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324819 True 1207 TUCP 0.47 1 64969549 64970755

Neighbor

gene id symbol gene type direction distance location
LOC118944694 ccdc93 coding downstream 73566 64884338 ~ 64895983 (-)
LOC110520386 LOC106586581 coding downstream 78562 64862026 ~ 64890987 (-)
LOC110520388 cssa25h3orf38 coding downstream 113698 64852503 ~ 64855851 (-)
LOC110520379 NA coding downstream 327984 64485789 ~ 64641565 (-)
LOC110520380 LOC106586540 coding downstream 795273 63911999 ~ 64174276 (-)
en1a en1 coding upstream 16998 64987753 ~ 64995840 (-)
c1ql2 LOC106586564 coding upstream 135974 65106729 ~ 65108799 (-)
c3h2orf76 cssa25h2orf76 coding upstream 175765 65146520 ~ 65150171 (-)
LOC110520397 sctr coding upstream 203203 65173958 ~ 65182654 (-)
LOC110520402 gja3 coding upstream 350139 65320894 ~ 65326014 (-)
G286520 NA non-coding downstream 90 64969235 ~ 64969459 (-)
G286463 NA non-coding downstream 41263 64891105 ~ 64928286 (-)
G286426 NA non-coding downstream 184698 64783433 ~ 64784851 (-)
G286299 NA non-coding downstream 191612 64777664 ~ 64777937 (-)
G286292 NA non-coding downstream 199523 64769797 ~ 64770026 (-)
G286523 NA non-coding upstream 503 64971258 ~ 64971597 (-)
G286536 NA non-coding upstream 7491 64978246 ~ 64978524 (-)
G286579 NA non-coding upstream 26473 64997228 ~ 64997456 (-)
G286687 NA non-coding upstream 144493 65115248 ~ 65115510 (-)
G284018 NA other downstream 2254372 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 7380366 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 7565974 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 7671787 57270782 ~ 57297762 (-)
G275250 NA other downstream 9558062 55410143 ~ 55411487 (-)
G286580 marco other upstream 43504 65014259 ~ 65029736 (-)
G286638 NA other upstream 83945 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 264425 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 327452 65298207 ~ 65300417 (-)
G287042 NA other upstream 476070 65446825 ~ 65447283 (-)

Expression


Co-expression Network