G286580 (marco)


Basic Information

Item Value
gene id G286580
gene name marco
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65014259 ~ 65029736 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU324898
TTAAACTGGTTGTTTACAAAGTGTAATTCAGAAAATACCATGTATTCTGTATAAACCTTCCTCCAGGGTACATTATTACAGGTAGGCCTCATTGTCTCACATCAGTGCGAAGGCCGTCTGCACTCATCTCTCTGATAACTCGGAAACACTCATGGGAAAGCTAAAAAGAAGTTTGACTACAATATGCTGTCCTAATATTCAAAAATGTTATCAAGGTGACATCGTCCACTGAACCCCCTTGAATCCTAATAAGAGTTATAGTTCATTTTAAAACTATAAACCTGTAGCtaatatttacatttatttaatcaCAAATTCTTCAATACCCTAATTCTACATTTAGTTAAGGTGTTTTGTGGGTGTAGAATAAGAGTTCATGAAAATCTAAATGTCCAcgaaaattagctagctagctagctaCACGAGTTTTCATGATAAGGCAGTTTCTGTTTTGCCGTGATTAGTGAGTTTTGCAGCACAGCTTGACTGCTTTAGGCTAGCTGCGATGTTATTGTATTGGCCAAATGTTACAAAGTAGTGAGGCACAGTGCCAGCTGTCAGAGTCAGATACATGCTGATTTCTTAGAACAGTCCCATAACTTTGGTTATTCATCAACAAGATTGGCAAAATAGCTACAGTAATGGCCATTCAAACACGTTATCACTATGCTCCTAGCTTGGGCAAGTTTTCTCAGCTGATCAAGCATGGTAGTAGTCAGTGCGTCATAGATACGTCATAGAGTTAGGAACTAGTGTTCGGCAGATGAGCAAAATCTAGATTTTTAGAGATGAGTTCCACGTCCTACAAGACTGACACCATCTGACGTGAGACAATGGGTAGACCTAAGTTAGCTACACGTTAGGTAAATGCCAAGTGTATATCAACAATGACTTACTAATGTTGTTTAAAAAAgataagatacagtagatgtaacAAGTCACAGTAACATGAATTACCATCTGTAACATGTTAATGTATGTGTGGACatactttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacgtgtgtacgtgtacgTCTCTCTCTTGCTGTGCACCTCTCCTACTCTGGATCCaggacacattcacacacactgcaccccaGCGTCCTCGTTGTGTTGACAGTTGCTGATGCCCATACCATTGTGAAGGCAATAAAACACACTGGCCTCTCTGCCTGTGCATCGCAGGTCATCCAACCAGATCCTACCGATTCCATGGCTGGCTGTGAAGACTGTGGAGGCTCGTTGGTACCCCAGCATCTTGCAGATCACTGTCCCGTCCAGAGTGTCAAAGCCGTCATCACACACCGTACCCCACTGCCCCGACCAcatcacctccactctcccaCGAGTCCCCCCGCCAGCGATACGCACATTTGCtgtcaCTGATCCAGCTGCTCTTTCACCCTTCTCTCCACGTGGACCTAGCGGTCCGGGACTTCCCGGCAACCCTGGAAATCcaacaagtCCTCTTGTTCCATTAACACCAGCAAGTCCTCTTGGTCCTTCAGGTCCTATGGGTCCAGGTAGTCCTGTCGGCCCTGTGTCACCCTTCAAATCAGGGGCCCCCTGTACTCCATCACGGCCCTGGGCTCCAGTGTGCCCTTTGATCCCATTTTGGCCTGGTATCCCTGGTAAACCAATGTGTCCCATATCCCCCTTTGGTCCCTGTGGTCCTGGCAGCCCAGGGGCTCCTGAACAGTTAGTAGCTGCACCGCCTGGTGTTCCAGCTCGTCCTTGTTGTCCAGTGGTACCATCTTCACCTTCGGGTCCTGGTTCCCCTGCTTCTCCCTTGGCTCCAGTCTGGCCATCAACTCCAGGGTCTCCTTTTTGTCCTGTCTGACCCCTGTCTCCCTTGTCCACCCTCACACCAGGTAACCCCCTCGCACCAGGTGGACCAGTAGGTCCCTGTGGGCCTGGTGAAGCTTTGAGTAATCTGAATGCTTTCACTGAGTCCTGAAGGAGAGTGGTGCTGGCGTTGACCGCACCCAGGTTTGTTCTCAGCTGGCCCAGCTGGCCATCCTCCCCACAGAGGCTGTTGACCTGAGTCTGTAACTTCCCCAGGTATCCTCTGAGAGAGATGGTCTCCAAACTGGTGTTTCTGGCAAGGGTACGGAGGTCCTCCTCCAGGGGGATGTGATTGTCGGTCAGCTTCGCTGTTCtggagccagaggaggagagactaCTAGCCTCCATCGAAAACACTTTGTAAAGGAAGAAGGCATTCAGAGCAGTCAGAAGGATGAGGTAAACGACAATAACATTTAGACATCGCTGTGCTCCTCTGGCCTTGGCTGGTTTTAGATCACTGCTCTGGAAGGTGTACAGGTCCGTCCTGCTCAGTTTCATGTCCATGTCATAAAGTGGGTTACTCTGGCAGAACGAGCTGACGTGGCCCTCTCCTCTGTCTACTGATGTCTCCATGTTACTCCAAAGTGACAGACAACAGCCCAGAATTCCTCCTCAAGGCCCTCTTATAACAACTCATCATTACGTAAAAAACATGGAATCCTCACTTTCTTATAAAACCCCTCCACCACCCGTTT

Function

symbol description
marco Predicted to be an extracellular matrix structural constituent. Acts upstream of or within defense response to bacterium and phagocytosis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in pulmonary tuberculosis. Orthologous to human MARCO (macrophage receptor with collagenous structure).

NR:

description
macrophage receptor MARCO-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324898 True 2557 TUCP 0.48 15 65014259 65029736

Neighbor

gene id symbol gene type direction distance location
en1a en1 coding downstream 22106 64987753 ~ 64995840 (-)
LOC118944694 ccdc93 coding downstream 118276 64884338 ~ 64895983 (-)
LOC110520386 LOC106586581 coding downstream 123272 64862026 ~ 64890987 (-)
LOC110520388 cssa25h3orf38 coding downstream 158408 64852503 ~ 64855851 (-)
LOC110520379 NA coding downstream 372694 64485789 ~ 64641565 (-)
c1ql2 LOC106586564 coding upstream 76993 65106729 ~ 65108799 (-)
c3h2orf76 cssa25h2orf76 coding upstream 116784 65146520 ~ 65150171 (-)
LOC110520397 sctr coding upstream 144222 65173958 ~ 65182654 (-)
LOC110520402 gja3 coding upstream 291158 65320894 ~ 65326014 (-)
gjb8 cxb6 coding upstream 296426 65326162 ~ 65330529 (-)
G286579 NA non-coding downstream 16803 64997228 ~ 64997456 (-)
G286536 NA non-coding downstream 35735 64978246 ~ 64978524 (-)
G286523 NA non-coding downstream 42662 64971258 ~ 64971597 (-)
G286520 NA non-coding downstream 44800 64969235 ~ 64969459 (-)
G286687 NA non-coding upstream 85512 65115248 ~ 65115510 (-)
G286701 NA non-coding upstream 94719 65124455 ~ 65124772 (-)
G286702 NA non-coding upstream 95794 65125530 ~ 65125741 (-)
G286703 NA non-coding upstream 96394 65126130 ~ 65126346 (-)
G286911 NA non-coding upstream 121377 65151113 ~ 65151459 (-)
G286522 NA other downstream 43504 64969549 ~ 64970755 (-)
G284018 NA other downstream 2299082 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 7425076 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 7610684 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 7716497 57270782 ~ 57297762 (-)
G286638 NA other upstream 24964 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 205444 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 268471 65298207 ~ 65300417 (-)
G287042 NA other upstream 417089 65446825 ~ 65447283 (-)
G287112 NA other upstream 550055 65579791 ~ 65580495 (-)

Expression


Co-expression Network