G286638


Basic Information

Item Value
gene id G286638
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65054700 ~ 65075985 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU324968
tttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctttttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttggcatggtctcatctgtctctctgtttggcatggtctcatctgtctctctgtttagcatgctctcatcggtctctctgtttagcatggtctcatcggtctctctgtttagcattgtctcatctttctctttgtttagcatggtctcatctttcTGTCTGTTTGGCATGTGCTCATCTATCTCTCTGttaagcatggtctcatctgtctctctgtttagcatggtctctctgtttagcatggtctcatctgtctgtctagcatggtctcatctgtctctgtgtttaacatggtctc
>TU324969
gattagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctttttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctttcTGTCTGTTTGGCATGTGCTCATCTATCTCTCTGttaagcatggtctcatctgtctctctgtttagcatggtctctctgtttagcatggtctcatctgtctgtctagcatggtctcatctgtctctctgtttaacatggtctcatctgtctctctgcttagcatggtctctctgtttagcatggtctctctgtttagcatggtctctctgtttagcatggtctctatgtttagcatggtctctctgcttagcatggtctctctgtttagcatggtctctctgtttagcatggtctgtctgtttagcatggtctctctgtctagcatggtctcatctgtctctctgtttagcatggtctctctgtttagcatggtctcatctgtctgtctagcatggtctcatctgtctctctgtttaacatggtctcatctgtctctctgcttagcatggtctcatctgtctccctgattagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctctgtttagcatggtctcatctgtctctttgtttagaatggtctcatctgtctctctgttaggcatggtctcatctgtctctctgtttggcatggtctcatcggtgtctctgtttagcatggtctcatcggtCTCTCTATTTAGCATTGTCTCATCTTTCTctttgtttagcatggtctcatctttctctttgtttagcatggtctcatctttctctctgtttggcatggtctcatctgtctctctgtttggcatggtctcatctgtctctctgtttagcatgctctcatcggtctctctgtttagcatggtctcatcggtctctctgtttagcatggtctcatctttctctttgtttagcatggtctcatctttctctttgtttagcatggtctcatctttcTGTCTGTTTGGCATGTGCTCATCTATCTCTCTGttaagcatggtctcatctgtctctctgtttagcatggtctctctgtttagcatggtctcatctgtctgtctagcatggtctcatctgtctctgtgtttaacatggtctc

Function

NR:

description
putative uncharacterized protein DDB_G0282133

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324968 False 485 TUCP 0.44 2 65054700 65055211
TU324969 True 1324 TUCP 0.44 3 65054700 65075985

Neighbor

gene id symbol gene type direction distance location
en1a en1 coding downstream 62547 64987753 ~ 64995840 (-)
LOC118944694 ccdc93 coding downstream 158717 64884338 ~ 64895983 (-)
LOC110520386 LOC106586581 coding downstream 163713 64862026 ~ 64890987 (-)
LOC110520388 cssa25h3orf38 coding downstream 198849 64852503 ~ 64855851 (-)
LOC110520379 NA coding downstream 413135 64485789 ~ 64641565 (-)
c1ql2 LOC106586564 coding upstream 30744 65106729 ~ 65108799 (-)
c3h2orf76 cssa25h2orf76 coding upstream 70535 65146520 ~ 65150171 (-)
LOC110520397 sctr coding upstream 97973 65173958 ~ 65182654 (-)
LOC110520402 gja3 coding upstream 244909 65320894 ~ 65326014 (-)
gjb8 cxb6 coding upstream 250177 65326162 ~ 65330529 (-)
G286579 NA non-coding downstream 57244 64997228 ~ 64997456 (-)
G286536 NA non-coding downstream 76176 64978246 ~ 64978524 (-)
G286523 NA non-coding downstream 83103 64971258 ~ 64971597 (-)
G286520 NA non-coding downstream 85241 64969235 ~ 64969459 (-)
G286687 NA non-coding upstream 39263 65115248 ~ 65115510 (-)
G286701 NA non-coding upstream 48470 65124455 ~ 65124772 (-)
G286702 NA non-coding upstream 49545 65125530 ~ 65125741 (-)
G286703 NA non-coding upstream 50145 65126130 ~ 65126346 (-)
G286911 NA non-coding upstream 75128 65151113 ~ 65151459 (-)
G286580 marco other downstream 24964 65014259 ~ 65029736 (-)
G286522 NA other downstream 83945 64969549 ~ 64970755 (-)
G284018 NA other downstream 2339523 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 7465517 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 7651125 57402984 ~ 57403575 (-)
G286953 LOC107579696 other upstream 159195 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 222222 65298207 ~ 65300417 (-)
G287042 NA other upstream 370840 65446825 ~ 65447283 (-)
G287112 NA other upstream 503806 65579791 ~ 65580495 (-)
G288578 NA other upstream 1766686 66842671 ~ 66842881 (-)

Expression


Co-expression Network