G288286


Basic Information

Item Value
gene id G288286
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66549701 ~ 66550419 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU326821
gcatgggctcagcacccgagccggcagaggaagatggtagtgatgcggagaggggggcaacggagaacgcgagctcctttccacgagctcggtgacgaagatcaacccgtcgctcaatgcgaatagcgagttcaatcaaggaatccacgctggaaggaacctcccgggagagaatctcatcctttacctctgcgcggagaccctccagaaaacgagcgagcaaagccggctcgttccagccactggaggcagcaagagtgcgaaactcaatagagtagtctgttatggatcgattgccttgacatagggaagccagggccctggaagcctcctccccaaaaacagatcgatcaaaaacccgtatcatctcctccttaaagtcctgatactggttagtacactcagcccttgcctcccagattgccgtgccccactcacgagcccgtccagtaaggagagatatgacgtaggcgacacgagcagtgctcctggagaaagtgtagggctggagagaaaacacaatatcacactgggtgaggaacgagcggcattcagtgggctccccagagtaacacggcgggttattgattctgggctccggagattcgaaagccctggaagtggccggtggatcgaggcggagatggtgaacctgttctgtgaggttggagacttgggtggccagggtctcaacggcatgtcgagcagcagacaattcc

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU326821 True 719 lncRNA 0.56 1 66549701 66550419

Neighbor

gene id symbol gene type direction distance location
LOC110520431 LOC106586619 coding downstream 11806 66490468 ~ 66537895 (-)
LOC118944607 LOC106582097 coding downstream 74642 66472339 ~ 66475059 (-)
LOC118964314 NA coding downstream 137328 66400067 ~ 66412373 (-)
LOC110520429 LOC106586615 coding downstream 253814 66268185 ~ 66295887 (-)
LOC110520425 LOC106582038 coding downstream 356214 66183116 ~ 66193487 (-)
LOC110504514 NA coding upstream 181818 66732237 ~ 66747293 (-)
rpe rpe coding upstream 470035 67020454 ~ 67023408 (-)
LOC110520437 LOC106586625 coding upstream 515938 67066357 ~ 67078648 (-)
LOC110520442 LOC106586628 coding upstream 674442 67224861 ~ 67236245 (-)
LOC110520443 LOC106586629 coding upstream 725310 67275729 ~ 67286960 (-)
G288284 NA non-coding downstream 4811 66544667 ~ 66544890 (-)
G288230 NA non-coding downstream 17532 66527685 ~ 66532169 (-)
G288172 mospd2 non-coding downstream 128771 66418818 ~ 66420930 (-)
G288116 NA non-coding downstream 213785 66335701 ~ 66335916 (-)
G287993 NA non-coding downstream 227105 66322367 ~ 66322596 (-)
G288287 NA non-coding upstream 4767 66555186 ~ 66555423 (-)
G288288 NA non-coding upstream 5149 66555568 ~ 66556204 (-)
G288290 NA non-coding upstream 7592 66558011 ~ 66558269 (-)
G288351 NA non-coding upstream 93571 66643990 ~ 66644350 (-)
G288356 NA non-coding upstream 95960 66646379 ~ 66646590 (-)
G287112 NA other downstream 969206 65579791 ~ 65580495 (-)
G287042 NA other downstream 1102418 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 1249284 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 1313793 65235180 ~ 65235908 (-)
G286638 NA other downstream 1473716 65054700 ~ 65075985 (-)
G288578 NA other upstream 292252 66842671 ~ 66842881 (-)
G289678 NA other upstream 1076413 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 1333333 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1656171 68206330 ~ 68208674 (-)
G290542 NA other upstream 2028684 68579103 ~ 68580707 (-)

Expression


Co-expression Network