G289360


Basic Information

Item Value
gene id G289360
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67479189 ~ 67484662 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328073
acacacacacaacggaaTCCACCCATATAGCAGAaataatacacagacacacagcagaaaccacaaacacacacacacagaagaaacAGCAAAAACCACACACACCcgtcccacaaacacacaggagaaaccagacgcacgcacacacacacacacaggagaaaccacacgcACACAGGagaaaacacacgcacgcacacacacaggagaaaccacacgcacaggagaaaccacacgcgcacacacacacacaggagaaaccacacgcacacacacacacacaggagaaaccacacgcacgcacacacaggagaaaccacacgcacaggagaaaccacacacacacacaggagaaaccacacgcacacacacacacacacacaggagaaaccacacgcacgcacacacaggagaaaccacacgcacaggagaaaccacacacacacacacacacacacacaggagaaaccacacacaggagaaaccacacacacacacacacacacacaggagaaaccacacacacacaggagaaaccacacacacaggaaaaaccacacacacaggagaaaccacacacacacacaggagaaaccacacgcacacacacacaggagaaaccacacgcacacacacacaggagaaaccacacacacacaggagaaaccacacacacacacacgagaaaccacacacacaggagaaaccacacacacacaaacacacacaggagaaaccacacacacacaaacacacacaggagaaaccacacacacaggagaaaccacacacacacacacacaggagaaaccacacgcacacacacacaggagaaaccacacacacacacaggagaaaccacacacacacacaggagaaaccacacacacacacacaggagaaaccacacacacacaggagaaaccacacacacacacacaggagaaaccacacacacacaggagaaaccacacacacacacacacacaggagaaaccacacacacacacacacaggagaaaccacacgcacacacacacaggagaaaccacacacacacacaggagaaaccacacgcacacacacacaggagaaaccacacgcacacacacacacacacaggagaaaccacacacacacaggagaaaccacacacacacaggagaaaccacacacacacacgagaaaccacacacacacacgagaaaccacacacacacacacacacacacaggagaaaccacacacacacacacacacacacacacaggagaaaccacacacacacacacacacacacacgagaaaccacacacacaggagaaaccacacacacacacacacaggagaaaccacacacacaggagaaaccacacacacaggagaaaccacacacacaggagaaaccacacacacacacacacacacacacacacacaggagaaaccactcgcgcacacacacacacaggagaaaccactcgcacacacacacacacacacacaggagaaaccacacgcacacacacacacacaggagaaaccacacgcACAAGAtaaaccacacgcacacacacaggagaaaccacacacacacatacacacaggagaaaccacacacacacacacacacacaggagaaaccacacacacaggagaaaccacacacacacacacacacaggagaaacgacacacacacacacacacacaggagaaaccacacacacacacacacaaacacacacacacaggagaaatcacacacacacaggagaaaccgcacacacacaggagaaaccactcgcacacacacacacacaggagaaaccacacacacaggagaaaccacacgcacacacacacaggagaaaccacacgcACAAGAtaaaccacacgcacacacacacacacaggagaaaccacacgcacacacacaggagaaaccacacacacacacacaggagaaaccacacacacaggagaaaccacacacacacacacacacacacacacacacacaggagaaacgacacacacacacacacacacacacaggagaaaccacacacacacacaggataaaccacacacacacacacaggagaaacaacacacacacacacacacgcacacacacacacacacacaggagaaaccacacacgcacgcacacacaggagaaaccacacacgcacacacacacaggagaaaccacacacgcacacacacacaggagaaaccacacacgcacacacaggagaaaccacacacacacacacaggagaaaccacacacgcacacacaggagaaaccacacacacacacacacacacacaggagaaaccacacacacacacacacacacacacaggagaaaccacacacacacacacacacacacacacaggagaaaccacacacacacacacaggagaaaccacacacgcacacacacacacacaggagaaaccacacacgcacacacacaggaaaaacaacacacacacacacacacacacacaggagaaaccacacacgcacacacacaggagaaaccacacacgcacgcacacacacacgcacacacaggagaaaccacacacgcgcacacacacacacaggataaaccacacacgcacacacaggagaaaccacacacgcacacacaggagaaaccacacgcacacacacacacaggagaaaccacacacacgagaaaccacacacacacacaggagaaaccacacacacacacagcagaaaccacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328073 True 2779 lncRNA 0.51 2 67479189 67484662

Neighbor

gene id symbol gene type direction distance location
LOC110520443 LOC106586629 coding downstream 192229 67275729 ~ 67286960 (-)
LOC110520442 LOC106586628 coding downstream 242944 67224861 ~ 67236245 (-)
LOC110520437 LOC106586625 coding downstream 400541 67066357 ~ 67078648 (-)
rpe rpe coding downstream 455781 67020454 ~ 67023408 (-)
LOC110504514 NA coding downstream 731896 66732237 ~ 66747293 (-)
LOC110520451 LOC106586637 coding upstream 39939 67524601 ~ 67542329 (-)
LOC110520452 LOC106586638 coding upstream 60935 67545597 ~ 67568698 (-)
LOC110520453 LOC106586647 coding upstream 132828 67617490 ~ 67636658 (-)
LOC110520454 LOC106586643 coding upstream 200388 67685050 ~ 67706221 (-)
LOC118944713 LOC106592868 coding upstream 291749 67776411 ~ 67786849 (-)
G289356 NA non-coding downstream 1159 67474617 ~ 67478030 (-)
G289346 NA non-coding downstream 24063 67454414 ~ 67455126 (-)
G289337 NA non-coding downstream 45341 67433642 ~ 67433848 (-)
G289327 NA non-coding downstream 49643 67411658 ~ 67429546 (-)
G289325 LOC106586634 non-coding downstream 73060 67405694 ~ 67406129 (-)
G289371 LOC105911894 non-coding upstream 16951 67501613 ~ 67502129 (-)
G289378 NA non-coding upstream 28252 67512914 ~ 67513155 (-)
G289382 NA non-coding upstream 34220 67518882 ~ 67519252 (-)
G289394 NA non-coding upstream 59166 67543828 ~ 67544233 (-)
G289421 NA non-coding upstream 106403 67591065 ~ 67591402 (-)
G288578 NA other downstream 636308 66842671 ~ 66842881 (-)
G287112 NA other downstream 1898694 65579791 ~ 65580495 (-)
G287042 NA other downstream 2031906 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 2178772 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 2243281 65235180 ~ 65235908 (-)
G289678 NA other upstream 142170 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 399090 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 721928 68206330 ~ 68208674 (-)
G290542 NA other upstream 1094441 68579103 ~ 68580707 (-)
G290567 NA other upstream 1141670 68626332 ~ 68647620 (-)

Expression


Co-expression Network