G292211


Basic Information

Item Value
gene id G292211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70122859 ~ 70164009 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU331351
TTATGCTTTCAAATTGCTATCGATAAAATGCATTTGGGTTCGTTGTcaatagGTAAGACCCTGAAGACCTATGAGCATGATGTCATTCCCTATCAGGggaaaacatttacatttcagtTGTTTAGTAGACCCTCTTATCCAGaaccacttacagtagtgagtgcaacCATTTCCATAACAAAGCTTTACCCACTATACTTTTCACCTCATATGGGCTACGTGTATGCTACATGATGTGGTGCTTTCACACAGCCAGAACAAAGACTTTGGGACTATAGTGCAATATTTCACATTGAAATGCAGAAGaaatgagagatagagagatgacaTAAGATACTACAGTAACTGCCTGCTGGTGTTCATTcgattgttgttttttttctttttgtgTGAATGTACAAGGTTTTCCGACCTTCGTAGGGAGCTAGCTGAGTAGAGCAGGTGGTAGGTGGCTTCTGTTTTTTGTTGAACATAGAAATGCATATGTTTAGGAGAAAGGACCCAAACCATTTCACAGTGCTTTCCCTATCGACAACATGGTTGCCTGCTACTGCATGATGGCAGAACTCGAGATTAGCCAAAGAGAGAACAGCGGAGTAAGAGACTTTCCTCTGTGAAAGCGTTGACTCAAAATGTTGCTTTCATGGCATACTCTGTGTGGTTCCTGCTATGAGAAAGCTGCTTCTGCCACTAGATGCTTATGCAGGACCATGGCTGTATTTGTTTATGTATTTTCTAAGAAATAGAAAAGTTGTTTCAATGAATTGTCTGTAGGTGGTAAAGGTACAGTATCTAGATAGAGTTGTGCACAGCATGTTTGGGTTTATGTGTTAGGCCTATTTATGTGTGAAGTGGTCTCATTTTGAACAACATGTTGAAGGGGAAAAGTGTTTGAAGCCTGAAGCTAAAATGTTGTTTGATAGATTTCTCTCTGAAAGAAGCATTGTTAATATTTCTAAATGACATTTCATTTCGGCTGACTGCACTCACCACCAACACTTGTGCCTTCTTCAGAACAAACACCATACCTTCAGAGAATCCCTGCTTTTCTCCAATCAGCACACAGTGAAAACCGGTGGACCCGCCATGGGCCAGACACTCATAAGACCCAGTTTTCATACTTTGATTTAACTTGCTgtattaaagaaaaaaataagcattgCACTTTACAGTGAATATTTCTCATTTCTGAAATAGGTTTTGTTTTTCCTGTTAGTTGAGAAAACTGGTCACAAACGTAGTTTGACTGAACTATTGAAACACTAGTAACATTTTACATCTGTAAGATGTCCTTTTTGGTAAAATGTTGGATGTGAAGAAATATGTTTTATGATTTTCCTGATTTGCtacttgactgtgtgtgtgtttgtatgaatGTTATATAGAAAGATTGTTTATTTATGTGGCTATTTATTTGAATAAAATTCACTTCCTAAACATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU331351 True 1443 lncRNA 0.38 2 70122859 70164009

Neighbor

gene id symbol gene type direction distance location
LOC110520492 LOC106586689 coding downstream 74466 70035040 ~ 70048393 (-)
LOC110520490 LOC106586686 coding downstream 151686 69949665 ~ 69971173 (-)
piga LOC106586684 coding downstream 184003 69933697 ~ 69938856 (-)
asb11 LOC106586685 coding downstream 189499 69927661 ~ 69933360 (-)
LOC110504590 lancl3 coding downstream 211698 69907305 ~ 69911161 (-)
LOC118964359 NA coding upstream 56321 70220330 ~ 70220464 (-)
LOC110520510 tfg coding upstream 607147 70771156 ~ 70806540 (-)
jagn1a LOC106586704 coding upstream 643340 70807349 ~ 70810049 (-)
LOC110520512 col8a1 coding upstream 646595 70810604 ~ 70837491 (-)
LOC118964322 NA coding upstream 732500 70896509 ~ 70907574 (-)
G292214 NA non-coding downstream 2130 70120408 ~ 70120729 (-)
G291884 LOC106586687 non-coding downstream 88096 70030764 ~ 70034763 (-)
G291896 NA non-coding downstream 150934 69971661 ~ 69971925 (-)
LOC110520487 NA non-coding downstream 227816 69892951 ~ 69895131 (-)
G292252 NA non-coding upstream 45558 70209567 ~ 70210180 (-)
G292256 NA non-coding upstream 51390 70215399 ~ 70215747 (-)
G292272 NA non-coding upstream 79860 70243869 ~ 70252589 (-)
G292274 NA non-coding upstream 84176 70248185 ~ 70248966 (-)
G292277 NA non-coding upstream 119647 70283656 ~ 70284188 (-)
G291977 NA other downstream 14909 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 126254 69980346 ~ 69996605 (-)
G291138 NA other downstream 866315 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 1272005 68846611 ~ 68850854 (-)
G290602 NA other downstream 1397945 68721808 ~ 68724914 (-)
G292753 NA other upstream 556027 70720036 ~ 70720591 (-)
G292919 NA other upstream 863610 71027619 ~ 71040152 (-)
G293984 NA other upstream 1739305 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 2009040 72121974 ~ 72206818 (-)
G294451 NA other upstream 2407240 72571249 ~ 72575432 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location