G292272


Basic Information

Item Value
gene id G292272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70243869 ~ 70252589 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU331428
TTCTTATTAGCACTTTATTTGAAGGTTCAGTTACCTGATTATTTGCCTTGTATATGGAGTGGTGCTCCAATTTAGTCCCCAAAATGTGTTCCATAGGTTATTATCATGTAAATACCATTTTACCATGCAGTTTCTAAGTAAATACCAGTCATCCTTCCTGTAATAGGATTGTGCTCAATTCAAATATGAAGGCAGTTAATTCAGGAGTTAAACTGAAATTCCAGTTCAATGATTGAAAAAGGGCATCTATTTTTAATGACTTCTCAATAAACTGAAATGGAGAAGCTATTTATGTTTTTCAATTTTAAATTCAAATCAATTCCTGAATTTACTGCCTTCAATTCAAATTGTACCCAACCCTGTTCCGTAAAAGGATTTAATGCAAAAAAGTTTTGTAAATCTGAGTGATTAGAGAAAACAGCATACACGTGAAAGCCCCCAAAACAGGTTTGAGATCCTCTGTATAGCAGAGGTCACAGCTGCCTTCATCATGACTTTGAGACATGAACATACATACACAACACCATATGAAACACCAGTCTAGTGTTGCATCATATCATTGGCCTTACACAATATGAGCATTGACTACATCTCAAATAACACGTTATTCCCACCCAATTCCCACTCAATTCCCACTCAATTCCCACCCAATTCCCACTCAATTCCCACCCAATTCCCATCCTATTCCCACCCAATTCCCACTCAATTCCCACCCAATTCCCACTCAATTACCACCCAATTCCCACTCAATTCCCACCCAATTCCCACTCAATTCCCACCCAATTCCCACTCAATTCCCACCAAATTCCCACCCAATTCCCATCCTATTCCCACCCAATTCCAGTAGACGACTATACCAACTTGTAACCACCTCAACTCTTTCTCACTCACACTCGTAAGTGTgcagacagaaaggcagacaTACTATTAAAACAACATGAAATAAACATAAGCCAATACATCTCAACGTGTGCCACAAAAACACATAACATCCATCAAATCAATAAAGAATATATTTATCCGTCAAAATTCGAGGCTCATTTATATTAAAAAGAACCGACGCTCACATATATTAAAATAACCTACGATCACATATATTAAATCGGAACAGCTCAGTGTTCCAAACCAAACTTGACACACACTTCATTAATTgttataataataaataattaattATTAAGACATCTACACATCCAGAGACCAAATTGATTACACAGTTAGTTCATTGTAAGCTAACATCATAGATATGGACACAAAAGTCTGAGATATCATCCATGAAGCAGCGAAATAGCAGGGATGCAAATGAAAGGCTAAAAGTTAGCTCTAAATGCTCTCTCAATGTTATATCAACATATCTTCTCTATATATGTGTAGCTTGGGTATTTACAGCGGTGATCAAAAACATTATGAAAATACAGTGTATGCTGGCTACTGTATATCTTTAAATATGGGTTAATAATTTCATACTAATCTGTGCATTGCTTTTTAAATGCTAGGCCCTGTATGGAGCATGCCAGACCACAAGGTGGTGCTGTGAGAGGACAGTGAGAAAAAGACTGCTAAGGGGCAGGATGATGTTGGCGTTTAGCACTGATGCAGGGTCAGATATCCATTCATCATCCTAATAGTTAAGTTTAGCATCAAGGCTTCGTGTGACCTGTTCCTAGATATGTCCCTAAGGACAACTTCTACCCAAAGTGTTAGAGATGGCTAAACTTGTAATATGGAGCAGGATTAAGTTGCCCATAGATGCTTAACCAAGGTCAGTGTTGCATTGGGGAGGGTAAGCTGATTTTACATAAGTGCTTACTAGAAACTTCCAACTGCAGCCTGAGTCCCTCAGTGGAGTTGAAGGTACTGTGCGAAAGTCTTCATGGCACAGTATCAAGTTAAGGAATGGTACTtctttatgagagagaggagggcagagagagagagagagagagaagggatggggaag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106583847

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU331428 True 1960 lncRNA 0.39 3 70243869 70252589

Neighbor

gene id symbol gene type direction distance location
LOC118964359 NA coding downstream 23405 70220330 ~ 70220464 (-)
LOC110520496 LOC106586692 coding downstream 108337 70125298 ~ 70135532 (-)
LOC110520492 LOC106586689 coding downstream 195476 70035040 ~ 70048393 (-)
LOC110520490 LOC106586686 coding downstream 272696 69949665 ~ 69971173 (-)
piga LOC106586684 coding downstream 305013 69933697 ~ 69938856 (-)
LOC110520510 tfg coding upstream 518567 70771156 ~ 70806540 (-)
jagn1a LOC106586704 coding upstream 554760 70807349 ~ 70810049 (-)
LOC110520512 col8a1 coding upstream 558015 70810604 ~ 70837491 (-)
LOC118964322 NA coding upstream 643920 70896509 ~ 70907574 (-)
tmem30c LOC106586702 coding upstream 692445 70945034 ~ 70950599 (-)
G292256 NA non-coding downstream 28122 70215399 ~ 70215747 (-)
G292252 NA non-coding downstream 33689 70209567 ~ 70210180 (-)
G292211 NA non-coding downstream 79860 70122859 ~ 70164009 (-)
G292215 NA non-coding downstream 114745 70128581 ~ 70129124 (-)
G292214 NA non-coding downstream 123140 70120408 ~ 70120729 (-)
G292277 NA non-coding upstream 31067 70283656 ~ 70284188 (-)
G292286 NA non-coding upstream 43886 70296475 ~ 70296816 (-)
G292294 NA non-coding upstream 58146 70310735 ~ 70311012 (-)
G292295 NA non-coding upstream 58523 70311112 ~ 70311344 (-)
G292300 NA non-coding upstream 63021 70315610 ~ 70315895 (-)
G291977 NA other downstream 135919 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 247264 69980346 ~ 69996605 (-)
G291138 NA other downstream 987325 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 1393015 68846611 ~ 68850854 (-)
G290602 NA other downstream 1518955 68721808 ~ 68724914 (-)
G292753 NA other upstream 467447 70720036 ~ 70720591 (-)
G292919 NA other upstream 775030 71027619 ~ 71040152 (-)
G293984 NA other upstream 1650725 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 1920460 72121974 ~ 72206818 (-)
G294451 NA other upstream 2318660 72571249 ~ 72575432 (-)

Expression


Co-expression Network