G292686


Basic Information

Item Value
gene id G292686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70613960 ~ 70615548 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU331923
gagaaaggatggagggataaagaagttataaaaggtgtgtgtgtgtatgacactGACCTCCTTGAGCCTCCTGTTCTGTGGCTGGAGTTGAGGTGCTGTGGAAAAACAACAGTCACTCACAGTTGAGAGGTTTCCCTCAGagatccaatcaaatcaaattataataGTTAAGAAGCACAAAACTATCTGGTGTTCTACTTGTAGTGGAGCCATAGAGATAGATACCATGTATCTGCAGCCATAGAGGTAGATACTGTGTATCTGCAGCCATAGAGATAGATACTGTGTATCTGCAGCCATAGAGATAGATACTGTGTATCTGCAGCCATAGAGGTAGATACTGTGTATCTGCAGCCATAGAGATAGATACTGTGTATCTGCAGCCATAGAGATAGATACTGTGTATCTGCAGCCATAGAGATAGATACTGTGTATCTGCAGCcatagagatacagtagataccgTTTATCTGTTTATACaatgtgccaagcttttagcgtcatacccaagaaactCGAgggtgtaatcactgccaaaggtgcttcaacaaagtactgagtaaagggtctgaatacttatgtaaatgtgatatttccgtttttaattttgaatgcatttgcaaacatttctagaaacctgtttttgcttcgtcattatggggtgttgtgtgtagattgatgaggattattATTTTTTGGATGCATTTAAGTATAAGGGGGTAACAtatcaaaatgtgtaaaaagtcaaggggtctgaaaatgTTCCCAAATGAACTGTACGGCCACAGCAacgggggagaggatgaggagtaaTATGGCCAGGTAAGTTTGAAGAACATTCAGAACTTTACCTGCACATATGTAGCCATGAGTTGTTGGGCTCACTACGGTTGGTGGAGcaggagtacagagagagagcagcaatgGGGAAAAGAATGAGACACATGTAAGACAAGGGTAATGCACAGTGAATACGCTCCAAGAAATGTTACAATGGCAATGAAAGTAACTACGACAGGATTGCATACTTTACCTTGTTGACCTTGTCAGCAACATTCTCTGAAATGGCAAAGATGGAAGACAGAAATGATACAACAGCAAGTAACGATTGAAGCGTGAATATagtagttacacacacacacatacaaaataaCAGCTGAAAGCCATCACAATTTGGATGAATAACGATGTGGAAGTtgcagacatacagtaccagtcaaacgtttggacacacctactcaatgcAGTCATGACACACACCTCATGTTTATATGGCTGTTTATATGGCTGTTTATATGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU331923 True 1299 lncRNA 0.40 2 70613960 70615548

Neighbor

gene id symbol gene type direction distance location
LOC118964359 NA coding downstream 393496 70220330 ~ 70220464 (-)
LOC110520496 LOC106586692 coding downstream 478428 70125298 ~ 70135532 (-)
LOC110520492 LOC106586689 coding downstream 565567 70035040 ~ 70048393 (-)
LOC110520490 LOC106586686 coding downstream 642787 69949665 ~ 69971173 (-)
piga LOC106586684 coding downstream 675104 69933697 ~ 69938856 (-)
LOC110520510 tfg coding upstream 155608 70771156 ~ 70806540 (-)
jagn1a LOC106586704 coding upstream 191801 70807349 ~ 70810049 (-)
LOC110520512 col8a1 coding upstream 195056 70810604 ~ 70837491 (-)
LOC118964322 NA coding upstream 280961 70896509 ~ 70907574 (-)
tmem30c LOC106586702 coding upstream 329486 70945034 ~ 70950599 (-)
G292669 NA non-coding downstream 32866 70579424 ~ 70581094 (-)
G292420 NA non-coding downstream 39701 70573179 ~ 70574259 (-)
G292384 NA non-coding downstream 49305 70555501 ~ 70564655 (-)
G292404 NA non-coding downstream 92693 70520225 ~ 70521267 (-)
G292402 LOC106586712 non-coding downstream 99086 70508687 ~ 70514874 (-)
G292773 NA non-coding upstream 127794 70743342 ~ 70744122 (-)
G292869 NA non-coding upstream 333849 70949397 ~ 70949788 (-)
G292927 NA non-coding upstream 425612 71041160 ~ 71041699 (-)
G292931 NA non-coding upstream 428092 71043640 ~ 71043881 (-)
G293042 NA non-coding upstream 547190 71162738 ~ 71172116 (-)
G291977 NA other downstream 506010 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 617355 69980346 ~ 69996605 (-)
G291138 NA other downstream 1357416 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 1763106 68846611 ~ 68850854 (-)
G290602 NA other downstream 1889046 68721808 ~ 68724914 (-)
G292753 NA other upstream 104488 70720036 ~ 70720591 (-)
G292919 NA other upstream 412071 71027619 ~ 71040152 (-)
G293984 NA other upstream 1287766 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 1557501 72121974 ~ 72206818 (-)
G294451 NA other upstream 1955701 72571249 ~ 72575432 (-)

Expression


Co-expression Network