Gene
RNA
| Item | Value |
|---|---|
| gene id | G293555 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 71454474 ~ 71455417 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein Shroom2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU332911 | True | 326 | lncRNA | 0.43 | 3 | 71454474 | 71455417 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cmss1 | cmss1 | coding | downstream | 444755 | 70950681 ~ 71009719 (-) |
| tmem30c | LOC106586702 | coding | downstream | 503875 | 70945034 ~ 70950599 (-) |
| LOC118964322 | NA | coding | downstream | 546900 | 70896509 ~ 70907574 (-) |
| LOC110520512 | col8a1 | coding | downstream | 616983 | 70810604 ~ 70837491 (-) |
| jagn1a | LOC106586704 | coding | downstream | 644425 | 70807349 ~ 70810049 (-) |
| LOC118964323 | NA | coding | upstream | 217042 | 71672459 ~ 71676171 (-) |
| LOC110520517 | LOC106586722 | coding | upstream | 253065 | 71708482 ~ 71716359 (-) |
| LOC110504652 | LOC106586714 | coding | upstream | 298862 | 71754279 ~ 71764744 (-) |
| rnaseh2b | rnaseh2b | coding | upstream | 318613 | 71774030 ~ 71785013 (-) |
| trim13 | LOC106586719 | coding | upstream | 477004 | 71932421 ~ 71937033 (-) |
| G293553 | NA | non-coding | downstream | 5404 | 71448166 ~ 71449070 (-) |
| G293528 | NA | non-coding | downstream | 74620 | 71379222 ~ 71379854 (-) |
| G293518 | NA | non-coding | downstream | 93074 | 71361169 ~ 71361400 (-) |
| G293514 | NA | non-coding | downstream | 97640 | 71356324 ~ 71356834 (-) |
| G293511 | NA | non-coding | downstream | 105156 | 71348833 ~ 71349318 (-) |
| G293570 | NA | non-coding | upstream | 28560 | 71483977 ~ 71484521 (-) |
| G293583 | NA | non-coding | upstream | 48468 | 71503885 ~ 71504279 (-) |
| G293596 | NA | non-coding | upstream | 70205 | 71525622 ~ 71525911 (-) |
| G293600 | NA | non-coding | upstream | 74851 | 71530268 ~ 71530485 (-) |
| G293601 | NA | non-coding | upstream | 75635 | 71531052 ~ 71531452 (-) |
| G292919 | NA | other | downstream | 414322 | 71027619 ~ 71040152 (-) |
| G292753 | NA | other | downstream | 733883 | 70720036 ~ 70720591 (-) |
| G291977 | NA | other | downstream | 1346524 | 70107540 ~ 70107950 (-) |
| G291901 | LOC106586687 | other | downstream | 1457869 | 69980346 ~ 69996605 (-) |
| G291138 | NA | other | downstream | 2197930 | 69256005 ~ 69256544 (-) |
| G293984 | NA | other | upstream | 447897 | 71903314 ~ 71903908 (-) |
| LOC110504660 | LOC106582021 | other | upstream | 717632 | 72121974 ~ 72206818 (-) |
| G294451 | NA | other | upstream | 1115832 | 72571249 ~ 72575432 (-) |
| G294697 | NA | other | upstream | 1319990 | 72775407 ~ 72776607 (-) |
| LOC110520539 | mfsd9 | other | upstream | 1420922 | 72870852 ~ 72881264 (-) |
