G293645


Basic Information

Item Value
gene id G293645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71604583 ~ 71605239 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU333007
tatttatacaggtttttctcattgagataacatctcttttccaagagagacttggtccaatagcagcagagggaacaacgtttcagacaaaacaatttacatacactaacacaacattaatgagggacagagacaagaacagtgagagggggagaggatggagagagaggagagaacagcgagagatgttggagaagggggagagaggatgagaggaagagagaggagtggataGTTATTTGCTACAGCTGTGGAGTGTTAACAGACAATCAATCTGTAAAGTGGAGTGTTAACAAAAGTGTTCTATCTGTAAAGTGGAGTGTTAACAGACAATCCATCTGTAAAGTGGAGTGTTAACAGACAATCCATCTGTAAAGTGGAGTGTTAACAAAAGTGTTCTATCTGTAAAGTGGAGTGTTAACAGACAATCCATCTGTAAAGTGGAGTGTTAACAAAAGTGTTCTATCTGTAAAGTGGAGTGTTAACAAAAGCATTCTATCTGTAAAGTGGAGAGTTAACAGAAGCGTTCTATCTGTAAAGTGGAGTGTTAACAGACAATCCATTTGTAAAGTGGAGTGTTAACAGACAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU333007 True 591 lncRNA 0.39 2 71604583 71605239

Neighbor

gene id symbol gene type direction distance location
cmss1 cmss1 coding downstream 594864 70950681 ~ 71009719 (-)
tmem30c LOC106586702 coding downstream 653984 70945034 ~ 70950599 (-)
LOC118964322 NA coding downstream 697009 70896509 ~ 70907574 (-)
LOC110520512 col8a1 coding downstream 767092 70810604 ~ 70837491 (-)
jagn1a LOC106586704 coding downstream 794534 70807349 ~ 70810049 (-)
LOC118964323 NA coding upstream 67220 71672459 ~ 71676171 (-)
LOC110520517 LOC106586722 coding upstream 103243 71708482 ~ 71716359 (-)
LOC110504652 LOC106586714 coding upstream 149040 71754279 ~ 71764744 (-)
rnaseh2b rnaseh2b coding upstream 168791 71774030 ~ 71785013 (-)
trim13 LOC106586719 coding upstream 327182 71932421 ~ 71937033 (-)
G293606 NA non-coding downstream 68928 71535454 ~ 71535655 (-)
G293602 NA non-coding downstream 72513 71531821 ~ 71532070 (-)
G293601 NA non-coding downstream 73131 71531052 ~ 71531452 (-)
G293600 NA non-coding downstream 74098 71530268 ~ 71530485 (-)
G293596 NA non-coding downstream 78672 71525622 ~ 71525911 (-)
G293680 NA non-coding upstream 49461 71654700 ~ 71654982 (-)
G293681 NA non-coding upstream 51184 71656423 ~ 71656833 (-)
G293685 NA non-coding upstream 54106 71659345 ~ 71659633 (-)
G293691 NA non-coding upstream 63870 71669109 ~ 71669337 (-)
G292919 NA other downstream 564431 71027619 ~ 71040152 (-)
G292753 NA other downstream 883992 70720036 ~ 70720591 (-)
G291977 NA other downstream 1496633 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 1607978 69980346 ~ 69996605 (-)
G291138 NA other downstream 2348039 69256005 ~ 69256544 (-)
G293984 NA other upstream 298075 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 567810 72121974 ~ 72206818 (-)
G294451 NA other upstream 966010 72571249 ~ 72575432 (-)
G294697 NA other upstream 1170168 72775407 ~ 72776607 (-)
LOC110520539 mfsd9 other upstream 1271100 72870852 ~ 72881264 (-)

Expression


Co-expression Network