G294642 (LOC106586782)


Basic Information

Item Value
gene id G294642
gene name LOC106586782
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 72686975 ~ 72687967 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU334219
CAGCAGGAGGGGTCCACTCTGCCCGTTTCTCCAAAAAGGCTGCCGTCCCTCCCACAGTCGATGGCCTGTCCCGGTCCACCCTCTTCTCTGTTGACACAGCCGCCCCCTCACTATTCCTCTGGTCGCCAGGGATCTTCTCACCTCTCACTAGGAGTTGGACTGGGGTTGCTGTTGGAGCTAAGGCTGGTTTGGGCTGGGGGATAGGGTTGAGATTTAGTGCGCTCCAAGGGGGCTGAGTGGAAGTTGCACCCATTGGGGCGATCCGTAGTGTTATCTGAGCTTGGGTCTGTGGAGTGGAGCAGAGGGTGGGCTGGTTTGCTCGTCGGCTGGACTGTGGGGTCACCTGAGACACGGCGCATTGTGTAGACTGGGCTAAAGGTTGAGTAGCGGTTGGTTGTGCTGCTCGAGTGTTGATTTGGTTGGATGTCTGTGTTGATGGTTTTGAGTTCTGTGTTGATTGTTGTGTCATTGTTTGTGGTTGTGTTCCGTTCTGTGTCCGTGGTGTTTTGGTGGTCTGCAGGTGTTTTGTGGTCTGTGTCACTGGTAGCTTTGTGGTCTGAGCCTGTGGTGGCGTTGTGGTCTGTGTCACTGGTAGTTTTGTGGTCTGTGTGGGGGCTTGTGCTGCTGTCTGTGGTGGTTTCACTGCATTCTGTGACTCCAGTAGTTTAGCAGTCAGGGgttgtgttgtggtctgagcCTGCGGTTGAGTTGGGGACTGCATGCCGGTGAACTCTCTGGGCAAACTGCTGGTGAAGAGCTGCTGGAGGCCCCTGGTCTTCCCCCATGCCATGCTCATCCACGATACGGCAGCCTGGGGTGCCGCATGGGGGGCAGTCAGGGGGTTCTGAGGGGCTGAGGTGGTAGCCTGGGCTTCTATGGGTAGGACAGGGAGGGTTTGGTCCTCTTTAGGTCTAGCTGGGGTGGTTTGGGCCTCTTTAATGAGAGGTGAGGGGGTAGGCTGGGCGGGGG

Function

NR:

description
mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU334219 True 969 lncRNA 0.57 2 72686975 72687967

Neighbor

gene id symbol gene type direction distance location
LOC110520531 LOC106582025 coding downstream 144847 72490848 ~ 72542128 (-)
LOC110520529 LOC106586732 coding downstream 420325 72264378 ~ 72266650 (-)
LOC110504660 LOC106582021 coding downstream 480157 72121974 ~ 72206818 (-)
LOC110520523 LOC106582019 coding downstream 572462 72010695 ~ 72114513 (-)
LOC110520527 LOC106586729 coding downstream 681186 71997354 ~ 72005789 (-)
LOC110504707 NA coding upstream 88749 72776716 ~ 72782874 (-)
LOC110504714 LOC106586779 coding upstream 103337 72791304 ~ 72838453 (-)
LOC110520539 mfsd9 coding upstream 182885 72870852 ~ 72881264 (-)
fhl2a fhl2 coding upstream 337321 73025288 ~ 73039384 (-)
uxs1 uxs1 coding upstream 474549 73162516 ~ 73266610 (-)
G294626 NA non-coding downstream 23732 72661725 ~ 72663243 (-)
G294495 NA non-coding downstream 39817 72646950 ~ 72647158 (-)
G294494 NA non-coding downstream 40942 72645574 ~ 72646033 (-)
G294491 NA non-coding downstream 41480 72643242 ~ 72645495 (-)
G294477 NA non-coding downstream 63338 72623177 ~ 72623637 (-)
G294644 NA non-coding upstream 2220 72690187 ~ 72690510 (-)
G294648 NA non-coding upstream 7502 72695469 ~ 72696023 (-)
G294691 NA non-coding upstream 76986 72764953 ~ 72799857 (-)
G294714 NA non-coding upstream 130639 72818606 ~ 72819652 (-)
G294715 NA non-coding upstream 131165 72819132 ~ 72821310 (-)
G294451 NA other downstream 111543 72571249 ~ 72575432 (-)
G293984 NA other downstream 783067 71903314 ~ 71903908 (-)
G292919 NA other downstream 1646823 71027619 ~ 71040152 (-)
G292753 NA other downstream 1966384 70720036 ~ 70720591 (-)
G294697 NA other upstream 87440 72775407 ~ 72776607 (-)
G296011 NA other upstream 884325 73572292 ~ 73572911 (-)
G296043 NA other upstream 944071 73632038 ~ 73633036 (-)
G296102 LOC106586753 other upstream 1085187 73773154 ~ 73775299 (-)

Expression


Co-expression Network