Gene
RNA
| Item | Value |
|---|---|
| gene id | G295797 |
| gene name | nck2 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 73068748 ~ 73099306 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| nck2 | Enables phosphotyrosine residue binding activity. Involved in several processes, including negative regulation of protein phosphorylation; positive regulation of T cell proliferation; and positive regulation of actin filament polymerization. Located in endoplasmic reticulum. |
| description |
|---|
| cytoplasmic protein NCK2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU335559 | True | 465 | lncRNA | 0.52 | 2 | 73068748 | 73099306 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fhl2a | fhl2 | coding | downstream | 29364 | 73025288 ~ 73039384 (-) |
| LOC110520539 | mfsd9 | coding | downstream | 187484 | 72870852 ~ 72881264 (-) |
| LOC110504714 | LOC106586779 | coding | downstream | 230295 | 72791304 ~ 72838453 (-) |
| LOC110504707 | NA | coding | downstream | 285874 | 72776716 ~ 72782874 (-) |
| LOC110520531 | LOC106582025 | coding | downstream | 526620 | 72490848 ~ 72542128 (-) |
| uxs1 | uxs1 | coding | upstream | 63210 | 73162516 ~ 73266610 (-) |
| st6gal2a | st6gal2 | coding | upstream | 238864 | 73338170 ~ 73505121 (-) |
| LOC110505436 | LOC106581976 | coding | upstream | 447893 | 73547199 ~ 73561315 (-) |
| grk1a | grk1 | coding | upstream | 492478 | 73591784 ~ 73597306 (-) |
| LOC110520555 | LOC106586764 | coding | upstream | 498136 | 73597442 ~ 73614530 (-) |
| G295785 | NA | non-coding | downstream | 19548 | 73046614 ~ 73049200 (-) |
| G295738 | NA | non-coding | downstream | 94943 | 72948008 ~ 72973805 (-) |
| G295753 | NA | non-coding | downstream | 102978 | 72964648 ~ 72965770 (-) |
| G295750 | NA | non-coding | downstream | 106074 | 72962307 ~ 72962674 (-) |
| G294763 | NA | non-coding | downstream | 175477 | 72893018 ~ 72893271 (-) |
| G295823 | NA | non-coding | upstream | 21359 | 73120665 ~ 73123169 (-) |
| G295832 | NA | non-coding | upstream | 34168 | 73133474 ~ 73139783 (-) |
| G295865 | NA | non-coding | upstream | 117637 | 73216943 ~ 73217812 (-) |
| G295979 | NA | non-coding | upstream | 377548 | 73476854 ~ 73478556 (-) |
| G296010 | NA | non-coding | upstream | 471945 | 73571251 ~ 73571774 (-) |
| G294697 | NA | other | downstream | 292141 | 72775407 ~ 72776607 (-) |
| G294451 | NA | other | downstream | 493316 | 72571249 ~ 72575432 (-) |
| LOC110504660 | LOC106582021 | other | downstream | 861950 | 72121974 ~ 72206818 (-) |
| G293984 | NA | other | downstream | 1164840 | 71903314 ~ 71903908 (-) |
| G296011 | NA | other | upstream | 472986 | 73572292 ~ 73572911 (-) |
| G296043 | NA | other | upstream | 532732 | 73632038 ~ 73633036 (-) |
| G296102 | LOC106586753 | other | upstream | 673848 | 73773154 ~ 73775299 (-) |
| G296100 | LOC106586751 | other | upstream | 709176 | 73808482 ~ 73809596 (-) |
| LOC110520572 | cep97 | other | upstream | 773667 | 73870489 ~ 73877576 (-) |
