G296102 (LOC106586753)


Basic Information

Item Value
gene id G296102
gene name LOC106586753
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73773154 ~ 73775299 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU335926
GGGAAATATATTTTATTAATAAAACGGGTGTGATCCTGTGGAATAAAgaaatgaaacaaaaaataatCCTGAGATTTTAGTTCAGTTTTTCCTCCACTTCTTCCCTTTATTatcttgttttttaaaatatatatatatgtatatgattCATTTAAATTAATACAAATGTCGTAATTACATAAGGTTCTTCCTTGCCATACACCTTACAGTTCATTTGTTGATTGGAGTAATTACTAGCAAATAAAACAGGAAATCAGTGcgttataaaaaaaaatgatttgatgTAGCCTACTTTCACCACAAAGTAATAATTAAAATATGTAACACAGGGTCAAAACAATTCCATAATTACACACATACTCAACTCAACATGGGGTCATACAACCCAAGGGCACTTGTTTTCATGGTAAAACTTAGGTCCAGTTGATTCACACCAACCACAAGGTAATTCATCAACCTCCTTGAAAGGAGTTCTTCTGAATAGCATGGTAATAGCTTTCTGTTAGCCTCATGTAGGAGACTAAGACACAGTAGCTGTTGAAGAGAGGCCTTCACCACCTAGACACAGATCTTGATCCAGTCCTTTCAGGTCTTTACAGGGCCGTGGAGAAGTGACCCATGGGCCATGTTTCAGTTAGAAATTTGGTCTCATCATATTAtcttctgtccttgagctgttcttgtcaaatTAACttatgtccttgagctgttcttgtcaaatTAACttatgtccttgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtggactccagaaagagtagctgctgcttttgcaacagttaATGGGGATGCTCATCAAATACCAAGACCAAGTCTAGGCCTAGTTTGTctatcaaataaaatcattttttGTATTTTCCAAATTCCGGTTATCAAGTGCACCAAGATCTGGTATTATTTTGATTGAGTAAATGTCCAAATTACTGAGCACCTTGGGCAGTTAACAACAGCCTGGAAATGGAGTAACATGAATGATTGTTTGTGAGGCATTAGAATCAAAGGGGAAATTATAGGGTAGTGCACCAGCATGGGATACTACTGAAGTAGGCTCCCTGTACCAGCAGATTAGCATTGAGGAGGATGGCTGTAATTCCCTTGGACAACCTGGAAATAGGACATGTTGGTCATCTTATGATTCGTCGTACTGGTCATTGTACCGATCATGCTGGTCATTAAGGCGGTCACGGCTGCCACCATGGCGAACAGGCGGGTCATCGAGGCGATCACGGCTGCCACCATGGCGAACAACAGGCGGGTCGTCAAGACGATCACGGCTGCCACCATGGCGAACAGGCGGGTCGTCGAGGCGATCACGGCTGCCACCATGGCGAACAACAGGCGGGTCGTCAAGACGATCACGGCTGCCACCATAGCGAACAGGTGGGTCGTCAAGGCGATCGCGGCTGCCACTAAAGCGAACAGGTGGGTCGTCAAGGCGATCACGACTGCCACCATATCGAACACGCTGATCGTCGAGGCGATCGCGGCTGCCACCATAGCGATCGCGCTGGTCGTCGAGGCGATCGCGGCTGCCACCATAGCGATCGCGCTGATCTCCATAGTTGTTGCGGTTGTCATCAGACTTCTCCTTACGGCCATCACTGCAATCTGTTCTAACACTTTGGTCATCGTGATCCATCTCCCCTTGCGTCTCGTATTGGTCATGCAGCACGATGCTCCCCTCAGTCCTGTCTTCCGGTATGTCGTCCCGGTAACCTGCCCCAACGTTGAGTGTCGGCGTGTCATGGAACTTCACCACTTCTGGAACTCTGAGAAACAGAGACGACAGATatatatgagagacagac
>TU335928
GGGAAATATATTTTATTAATAAAACGGGTGTGATCCTGTGGAATAAAgaaatgaaacaaaaaataatCCTGAGATTTTAGTTCAGTTTTTCCTCCACTTCTTCCCTTTATTatcttgttttttaaaatatatatatatgtatatgattCATTTAAATTAATACAAATGTCGTAATTACATAAGGTTCTTCCTTGCCATACACCTTACAGTTCATTTGTTGATTGGAGTAATTACTAGCAAATAAAACAGGAAATCAGTGcgttataaaaaaaaatgatttgatgTAGCCTACTTTCACCACAAAGTAATAATTAAAATATGTAACACAGGGTCAAAACAATTCCATAATTACACACATACTCAACTCAACATGGGGTCATACAACCCAAGGGCACTTGTTTTCATGGTAAAACTTAGGTCCAGTTGATTCACACCAACCACAAGGTAATTCATCAACCTCCTTGAAAGGAGTTCTTCTGAATAGCATGGTAATAGCTTTCTGTTAGCCTCATGTAGGAGACTAAGACACAGTAGCTGTTGAAGAGAGGCCTTCACCACCTAGACACAGATCTTGATCCAGTCCTTTCAGGTCTTTACAGGGCCGTGGAGAAGTGACCCATGGGCCATGTTTCAGTTAGAAATTTGGTCTCATCATATTAtcttctgtccttgagctgttcttgtcaaatTAACttatgtccttgagctgttcttgtcaaatTAACttatgtccttgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtctattgagctgttcttgtggactccagaaagagtagctgctgcttttgcaacagttaATGGGGATGCTCATCAAATACCAAGACCAAGTCTAGGCCTAGTTTGTctatcaaataaaatcattttttGTATTTTCCAAATTCCGGTTATCAAGTGCACCAAGATCTGGTATTATTTTGATTGAGTAAATGTCCAAATTACTGAGCACCTTGGGCAGTTAACAACAGCCTGGAAATGGAGTAACATGAATGATTGTTTGTGAGGCATTAGAATCAAAGGGGAAATTATAGGGTAGTGCACCAGCATGGGATACTACTGAAGTAGGCTCCCTGTACCAGCAGATTAGCATTGAGGAGGATGGCTGTAATTCCCTTGGACAACCTGGAAATAGGACATGTTGGTCATCTTATGATTCGTCGTACTGGTCATTGTACCGATCATGCTGGTCATTAAGGCGGTCACGGCTGCCACCATGGCGAACAGGCGGGTCATCGAGGCGATCACGGCTGCCACCATGGCGAACAACAGGCGGGTCGTCAAGACGATCACGGCTGCCACCATGGCGAACAGGCGGGTCGTCGAGGCGATCACGGCTGCCACCATGGCGAACAACAGGTGGGTCGTCAAGGCGATCACGACTGCCACCATATCGAACACGCTGATCGTCGAGGCGATCGCGGCTGCCACCATAGCGATCGCGCTGGTCGTCGAGGCGATCGCGGCTGCCACCATAGCGATCGCGCTGATCTCCATAGTTGTTGCGGTTGTCATCAGACTTCTCCTTACGGCCATCACTGCAATCTGTTCTAACACTTTGGTCATCGTGATCCATCTCCCCTTGCGTCTCGTATTGGTCATGCAGCACGATGCTCCCCTCAGTCCTGTCTTCCGGTATGTCGTCCCGGTAACCTGCCCCAACGTTGAGTGTCGGCGTGTCATGGAACTTCACCACTTCTGGAACTCTGAGAAACAGAGACGACAGATatatatgagagacagac

Function

NR:

description
cell surface A33 antigen-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU335926 False 2011 TUCP 0.44 2 73773154 73775299
TU335928 True 1927 TUCP 0.43 2 73773154 73775299

Neighbor

gene id symbol gene type direction distance location
zgc:92313 LOC106586754 coding downstream 13420 73739671 ~ 73759734 (-)
LOC110520558 LOC106586756 coding downstream 75792 73661996 ~ 73697362 (-)
LOC110520557 LOC106586760 coding downstream 121522 73642520 ~ 73651632 (-)
LOC110520555 LOC106586764 coding downstream 158624 73597442 ~ 73614530 (-)
grk1a grk1 coding downstream 175848 73591784 ~ 73597306 (-)
LOC110520571 LOC106586749 coding upstream 76785 73852084 ~ 73868375 (-)
LOC110520572 cep97 coding upstream 95190 73870489 ~ 73877576 (-)
LOC110520575 LOC106586746 coding upstream 108242 73883541 ~ 73889222 (-)
LOC110520576 NA coding upstream 185117 73960416 ~ 73973401 (-)
LOC118964355 NA coding upstream 198153 73973452 ~ 73973615 (-)
G296072 NA non-coding downstream 51645 73721161 ~ 73721509 (-)
G296071 NA non-coding downstream 52801 73720108 ~ 73720353 (-)
G296069 NA non-coding downstream 55693 73717172 ~ 73717461 (-)
G296068 NA non-coding downstream 56361 73716305 ~ 73716793 (-)
G296057 NA non-coding downstream 73593 73697713 ~ 73699561 (-)
G296117 NA non-coding upstream 36655 73811954 ~ 73813130 (-)
G296120 LOC106586750 non-coding upstream 42223 73817522 ~ 73818469 (-)
G296129 NA non-coding upstream 48893 73824192 ~ 73824664 (-)
G296141 NA non-coding upstream 69988 73845287 ~ 73845978 (-)
G296043 NA other downstream 140118 73632038 ~ 73633036 (-)
G296011 NA other downstream 200243 73572292 ~ 73572911 (-)
LOC110520539 mfsd9 other downstream 892300 72870852 ~ 72881264 (-)
G294697 NA other downstream 996547 72775407 ~ 72776607 (-)
G294451 NA other downstream 1197722 72571249 ~ 72575432 (-)
G296100 LOC106586751 other upstream 33183 73808482 ~ 73809596 (-)
G296166 LOC106581959 other upstream 102420 73877719 ~ 73880371 (-)
G296315 NA other upstream 463888 74239187 ~ 74239795 (-)

Expression


Co-expression Network