XLOC_022545 (zbtb39)


Basic Information

Item Value
gene id XLOC_022545
gene name zbtb39
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36660750 ~ 36670369 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044468
TGGACCCCACTGAATCTAAAAAAGATTGTAACcgacaaaatttaatttaaaatcattttacatgTTAAAAATGGTTATAGTTCATGTTTTAATAAAGTCTTTTGATAGTTAAAAATCCAATTTCCTCATTTAGCAGTAAAACTGACTCTTTGCAACACAATATTAGCCTAAATAAACATGTTTCCTAGTGAAACGTTGACGTTTATTGCATAGGATAACAAGTTTCTCCATTTGAGGCGCTCCTTCCCTCTGCTTTGGTGTTGAATTTTTTTAGTCCTTTATGAGAAAATGGTcgtgttttaaaaaacatatcaAGCACTTAGACTGCATTTTGGCCATCACACACGCGTTCTAAATCAACCGAGTGATCTAGGTAGCCAGCTCACTAGGTATTGAGACACCGCCCGTGTCTATGCATGGACGACTGTCTGGGCTAACAGGACCCGATTGAGATTATTAACCTTACGCAATCTAGCAGCACTATATGGTCCACATCCTGGCTTTGGTCAACATTGGCAGGCATGCGGATCAGGCTGCAGGGCTCCGGCCACGCGGCCCGTCTCCTCTCCGAGCTCAACCGCTGCCGCCTGTCTCGCCTCCTCTGTGACATCATCCTCCAGGTCGGGGGGCGCTCTTTTCCGGCTCATCGCGCAGTCTTAGCATGTTCCTGCACGCACTTCAACAGCCTCTTCTCCAGATGCTCCAGCAGCCAGGGTGCCGTTCCCACCACCTTCTCTGTGGATTTCGTCTCGGCCTCCAATTTCGAGAAGGTGCTGACGTTTATCTACACGGGGGAGATTTTCACAGACTTGATCGATGTGGGTGTGTTGTATGAGTTGGCGGAAAGGCTCGGCGTGAGGGAGTTGGTGAACGCTTGCCACGCCACCTTTCCTGACCTACAAAGCTCCAGCTCTGGAAACACCACAGGCGATGGAGACTTGGAGAGTGATATGGTGTCTACTAATGCGGTGGCTGCATCCGTTTGCTCGTCTTCCGCAGCGTCCTGCTCTTCCCTGTCGTCTTCAGCCGCTCCAACACCTGTAACTCCATCTCCAGTTTCCCAGGTCAGAAACGGCAGGTTGAATCGATCCCATCTGGCCGCACAATCACCAAAAAACGAAGACTTGCAGGTACATTTGGGTTACAGCCAACAGGAAATAAACAAGCCAAGCCCGTCAGATAGTAACCGTTCTGCAGACACCCTTCCAGGCCTCACTTTGCAGCTCAAGCAAGAGGATGAAGAAGACGATGATGAAGAAAATAGGGGAAGTAACTCAGTAGACCAGGTTGTCATTAATGGTAGCAAACCAACATTTGGGGCTCAGGAAACATGTTCAGTTCCTGATTCTTCAGCTCAGGTTGTTGGAGAAACCTGCGCTCCTTCATCATCCTCCATTGACCCGTTGGATAGTTTGCAACTTAGTGCTGTTGCAGGACCAATCAAAGAGTCCGATTTTTTTGAGGAAGATGATGCTAGGAAGAGGTCAAGTGTTCAGGAGGAGCAGACGGAGAGTGGTGATCAATGGCGAGCTCTTTCTGAGGACATCATTGAGCTGAGTGACGAAGAGGAACACTTTATAGTGGAGGAGGAGGACGACGAGGACTTGATGTGTATTGAGAACGGTGAAAATGGTGCATCTCTTGGGCAGATGTCTCCATCTCTGCCGTGTAAATCATGTGGGATGCTGCTTCCCGCAGAAAATGGCATCATTCGGACTCATGCGGAGACGCACCTTTCGGATTCGGGTTCTTGTCAGGTGTGTGGCGCATCCTTCTCGGACCGTGCCGCTGGTGTTGCACATGCACTCACTCATGTGGGCATCTTGCTCTTCTCGTGTGACGTTTGCGAGCACCAGTTTAGGACTGAGATGGCGCTGATTCACCACAGACGTCAGTCAGCAGCCAAATGTGTCCCGCAAAACCCTGAGCAGATGAACGGAGCCGCCCAAAGGCAAGGAGGGGAACTGCAGTGCGCCGTCTGTGCTAAATCCATAGCCAATGACTTCAAGGCTGTCAGAGACCACGTCCAGAGCCACGCATGCTTAAGGACATTGCGCTGTGGAGTGTGCCAGCTCTCTCAGCCCTCACGTTGCGCCCTCCTGtggcacacactcacacacctcttTCCTATTTACACCTGTCCACAATGCTCCAGCCCCTTCCTAGAGAGCTCTCAGCTGGACCGGCACCTGTCTCTACATGCGGAGGAAGAAGAAGCTTCAATGAAACAAGTCGACGGCAGTCCGGAGACCAGCGGAGAAGGCCAGGCCGAGCTGCGATGCTTTCTGTGCCCACAAACCTTCCGCTCTGAGGCGGCGTTTCATTACCATCTCAGCATGCATACAAACGAGCTCCAGGGCGGTCAGGTATGGCCAGGAAAACGCAAGGCAGACCAGCTTCTTGAATACTCCTCGTCCTCCAGTTCTCCTTTAGAGCCGGGCGGTTCCGGTAAAGGAGGTTTTAATGTAGGTTTCAACCTACAGGACAAAATAGCTCCCGGTGGACATTTCCCAACCGGACTTGTTTTAAATGGCAATTCCATCGGAGCCGCAGGGCTTAGAGAAAAATTATATCGTTGTCGTTATTGCGGTAAACATTTCGCACACTCGGGCGAGTTTACCTATCACCTCCGAATTCATACAGGTGAGAAACCGTATCAGTGCAAAGTATGTCTACGGTTTTTCCGTGGCCGTTCCACCATGATCTGCCACCTGAAGACGCACTCGGGTGCGCTCATGTACCGCTGCACCGTCTGCGGGCTGTTTTTCTCCACACTTAAGATGGTTTCTTCGCACATGGAGGTCCATAAAGACCAGCTGCCAGCCGATTTTAACATTGAGGAGACCTTTATGTATAACGACCACTCTAAAGACCCCGTCCCAAATCTGGACACCTGAAAAACAGCTGAAAATCTCTCCGTCACACTGTGTGCCCGGTTTACTTACTCAGTTTGTCGTTGAGGATGAGTAGACTTAGAATGTAATAACTCCGTGTTTGGTGTGTTTGTGTCGTCGTGTGCagaaccctttttttttttaaagattaaattaaaGGCAGATCTTTATTTTAAGAGATGTAATGCTAATACTTGACCACTTGATGGCAAGAGAGACACATTGGAAATCAAACTTTTTTGAAAGCaccttgtttttttaaatatattttctcatGCCTTCTTCTTTACATTTTAGAGTCTCTGCATAGTCATAACTAAAATAAACATATCAAAAGTATCTTTTACTGTAGCTTTTCAAACTTTTGCCAAGAATACAGTGAGTTGTTTGACCAAACAGCACTTTTTGGCTGCTTTTCATTCTCTTATCTGTTCTAACTCATTCATTTAAAGTGAAATTTGTTCCTAAAATAAGTTTAGGTCATTAATATAAACACGGGTCATACTTTGATGGTTCATTGGTTAAATttatgttacattgcatctacatgtcaactaattctctaTTTCTAACTAATAGTTCACTGTCAGTTTAGTGAAAGTTGACAtgaacttgcaaagtttcttacagtcagttgAATATCTgtttgaaggagcagtatcagcaaatattaagcagacagtctactaatagtcaaatggaccatcaaaataaaatatagagcTAGCTGCCTTAGCAAGTGCAATTTAATCCACTAAAGAAgacagtttgttttggtaatctttgaTCAacgtctgaccatttgcttctgtgtttggagtggCAGTCCTTCTGACTTCAACCACATTagtcttagccacgcccctctaaccattagtttgctatttgtggatgatgtgcaaaaagaaagccccgccccctactcaatattcagttttagttggaagtacatcaacatactgaaaaaaaaagtctcagcaacttccaatTCATACCAGTAACCATAAACTACTAAAGTTTCAGCTAAATCTGTACTGATGGACTACTGAAGAAGAAAAGTCACCCACATTGGATGAGCTAGGGAGTTCAGATTAACTCCAACAAATTCAGCCAAACGTCTCCAAAGTCGCATTTATGTTTTATCTCTTTATTGGGCTAAGAAAAATTTCAAATATGGTAACTTTAATGacttttattacaatataatatgttttttagACACAAAAGTCTTTTAATAACGTCCAGTAACACTCCATGGGTTTTAATATCTCAGTGAGTGGCCTATAAAGGGTTAATCCAACTCATCTTTAACAGGATGTCCAAGTGCTGATGTGCAATTACCTCTATTTACTCTTCCGGCAGTCTTTCACAATAAGCTAAGGCTCTAGAGAAGCACAAACGCAAGTGAGCGTTGAGAATAAACCAACTTTGTTTCTActttttctgataaatacagcAGTGCTCTAGGTCAAGGATATAAAAAGggtcactttttaaataaataaataaataaaggtacttTTCTGTTACAGAATAGCTGTTATTTTTATAGTAGTGTTAAGTATCATTTAGAAATAGCAACTGGTTTTTGAGATGCAGTACCATAGAGTTTGTATAGTCTGTTgtacataaataattttttaacaccatcAATGAACGTTATTTGGAAAATAAGGGATTTAGACTGAGGTGCTAATATATCAGTTGTTTCTTACGGCAGTGTTCACTTTCTCGGTACATTTTATGTTAGTTTACATGTTTCAGTACAAACCGTGTTGTCATGTGGGAAAGAATATAGGCTCTCTTCTGAATGCTGAGATGTTTTTCTGTACCATTTCCAAGCAGTTATATGCCTTTTATTCAGTATGTCTCTTTTTTATGTATAAATGGGACAGGTTTTAttattactgtacattttaatttcactttaaaaCCAGTTTGTCACACTGGTCCATTCATGACGTAATGTCACtggtcaacaacaacaacaacaaagcgtGTTTTCAAAATTAATGGGACAGTGTTGTGATAGCTTTATTTGAAATGTAGCACAGAAAAATACTGGCTGAACAGAACAGCCTTATAAATTGCCAAGTGTTTTCAAATATTCCATCACGTTTTATCAATCAGTCACTTTTTTAGGgcaaaaaaatgcatattatagtTTTTATCATGGTATGTAGGAGACAGACATCTTTATCGACTCTCATTTGTGTTAAATTTCAGGTCCTTTTTGTACTATATTTTACTTTCAACATAAAATAATTGCCTTATATTACTTGtgttatttatatgatttataaatcGGTTCAAATGTCAGTATCAGAAATCTGTTTTACAACAGTTGTACTTGTGTTCTGAATAAACAAACTGTACTTACAAAACTAGTCAATGAGTCATTTTAAAGCTGCCatactgcattggtttaataagttaaattgttgtCTGATATTTACATAGTAGGTTTATAGCTTTGGTATGGTCCAAAATGTGTCCCATAcataagctcatttgtcctattttgactgatACAGTGCATACGGAAAGAATTCATAGCGCTTcaatttttccacttttttatcttacag

Function

symbol description
zbtb39 Predicted to enable metal ion binding activity.

GO: NA

KEGG:

id description
ko03000 Transcription factors
ko04121 Ubiquitin system

Ensembl:

ensembl_id ENSDARG00000019265

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044468 True 5482 mRNA 0.42 3 36660750 36670369

Neighbor

gene id symbol gene type direction distance location
XLOC_022544 NA coding downstream 51967 36605744 ~ 36608783 (-)
XLOC_022542 spryd3 coding downstream 68314 36497518 ~ 36592436 (-)
XLOC_022543 FO704757.2 coding downstream 150631 36509997 ~ 36510119 (-)
XLOC_022541 zgc:174906 coding downstream 211639 36443022 ~ 36449111 (-)
XLOC_022540 csad coding downstream 219057 36424768 ~ 36441693 (-)
XLOC_022546 agap2 coding upstream 4838 36675207 ~ 36724575 (-)
XLOC_022547 CU571398.1 coding upstream 40655 36711024 ~ 36754685 (-)
XLOC_022548 BX321896.1 coding upstream 48006 36718375 ~ 36718495 (-)
XLOC_022549 hipk1a coding upstream 146117 36816486 ~ 36857966 (-)
XLOC_022550 CR926464.2 coding upstream 158103 36828472 ~ 36828588 (-)
XLOC_022538 BX571773.1 non-coding downstream 338626 36322010 ~ 36322124 (-)
XLOC_022535 NA non-coding downstream 382154 36110214 ~ 36278596 (-)
XLOC_022534 BX005254.4 non-coding downstream 565382 36092346 ~ 36095368 (-)
XLOC_022551 NA non-coding upstream 197676 36868045 ~ 36869244 (-)
XLOC_022554 CABZ01054876.1 non-coding upstream 289422 36959791 ~ 36959912 (-)
XLOC_022555 NA non-coding upstream 326835 36997204 ~ 37000484 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_01955349_01972242 ZBTB39 coding CI01000001 null 1955349 ~ 1973010 (+)
bowfin (Amia calva) AMCG00008832 zbtb39,LOC102796472,LOC106567078 coding CM030126.1 CM030126.1 12913536 ~ 12917796 (-)