XLOC_022549 (hipk1a)


Basic Information

Item Value
gene id XLOC_022549
gene name hipk1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36816486 ~ 36857966 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044472
ATGTCCACACAAATGCAAGCCTTTTCCTCTCCCTCCGTGTCCTCCAGCGGCATATCCCGCTCCAAGAAACTGAAGGTGGAAAACCATGCATGGAACGTGAGCGAGAGCAGCTACTACCAGCACAGCCCCAGCCAAACCAACGGTTCCTCTCCTTCCACATCTGGATTCAACCCCAGCTACAACTCCTCCAGCCTGGTGTTTCCTCCACCCGGAGCATCGAGGGAGCAGACGGTGGTCCGCGCGGCGGACAGCACCGGCAGTGGCCCGGAGCCTTCATcatcctcctcatcatcatccACATCCAGCCACCGCGGAAAAGATGGCTATCAGAAACGGGCCAGTCTGAAGCGGAAGAGCGAGGAGGTGGACAGTAGTGACAGCGTGCAGATTTTGGAAGAGCTTTCAGCGCCTGTGCTCCCCAACCGCGTAGCCGGAGGTGGAGGAAACGCCACGGCTCAGTCCATCGCTCATTCCACGTCCACCACCAAAAGCAGCAACTCCCACAGCGAGGGCGACTACCAGCTGGTGCAGCACGAGATCCTCTGCTCCGTCTCCAACAGCTACGAGGTCCTGGAGTTCCTTGGCCGGGGAACTTTCGGACAGGTCGCCAAATGCTGGAAGCGGGGAACCAATGAGATCGTGGCCATTAAGATCCTCAAGAATCATCCTTCGTATGCGCGCCAGGGTCAGATAGAGGTGAGCATCCTCAGCCGTCTCAGCACAGAGAATGCAGACGAGTTCAACTTTGTGCGCTCCTACGAGTGTTTCCAGCACAAGAACCACACGTGTCTGGTGTTCGAGATGCTTGAGCAGAACCTCTACGACTTCCTCAAGCACAGTAAGTTCAGCCCGCTGCTCCTCAAGTGCATCCGGCCGGTTCTGCAGCAGGTATCGACAGCCTTGATGAAACTCAAGAGTCTGGGGCTTATCCACGCTGACCTAAAGCCTGAGAACATCATGCTGGTGGACCCCATCAGACAGCCCTACAGGGTCAAGGTCATCGACTTCGGTTCTGCCAGTCACGTCTCTAAGGCCGTGTGCTCAACTTACCTGCAGTCTAGATATTACCGAGCTCCAGAGATCATTCTGGGCCTTCCGTTCTGTGAGGCCATTGACATGTGGTCTCTGGGTTGTGTCATTGCTGAACTGTTCCTGGGCTGGCCTTTGTATCCAGGAGCTTCAGAATACGATCAGATTCGGTACATCTCCCAGACTCAAGGTTTGCCAGCGGAGTATCTCCTGAGCGCTGGCACTAAAACCAGCCGTTTCTTCCACAGAGGCCCAGACTCCAGCTACCCTCTCTGGAGACTGAAGACTCCCGCCGAGCACGAGGCTGAGTTTGGCATCAAGTCCAAAGAGGCTCGCAAATACATTTTCAACTGCCTCGATGACATGATGCAGGTCAATATGACTAACCTAGAGGGCACAGACATCTTAGCGGAGAAAGCTGACCGGAGAGAGTTTATCGACCTGCTAAAGAAAATGCTAACATTAGATGCGGACAAGAGAATAACACCCACCAAGACCCTCAACCACCCGTTTGTGACGATGACCCACCTGCTTCACTTCCCACACAGCTCTCATGTGAAATCCTGCTTCCAAAACATGGATATCTGCAAGCGCAGGTGCACCGCCTTCGACAACAACAAAAACCTATTCAGCAGCCACAATGGCCCGAGCGCAGCCGCCAACCTCACCGTCACGTTCAGCAGTCAACTCAATCAGCACAGCCAGATGGCCTCCACAGGGGGCCAGTCCCTGTCTCTTAGCAGCAACGTTCCTTTACTGAACTACCAGCCTGGTCTGTACCAGCAGGCCACTATAAATATCCCAGGCTTGGCTCAGCAGAGTGTGCCGCTGCAGGCTCGCCCTACTCAGCTGTGTGCCCAGACAGAGCCCTTCCAGCAAACCCTCATTGTGTGCCCTCCTACCATCCAGGGGCTGCAGACCTCCAACAAACACACTGGCTATCCTGTGAGAATGGACAACTCTGTGCCCATAGTGCCCCAAAACCAGTCCACACAGCCTCTGCATATTCAGCCCAGCATGTTGACACAGGTAGGCATAGACTTGCATAGTTTTTTATGCGATcccttaccatcatggcctcccaatcatccccatccactgaattggctctattactTTTACTTCACTcaaccaatagctggtCAGGGCTGGCCAGCAGGTACCCAGCAGATCCTCATTCCCTCTTCATGGCAGCAGATGTCAGGCATGGCCATGCACAATCCCAGCCAGCCTGTCCTGTCCACAGATTCACCCATGAGCTCGCTGCTCTCAGACAACAGCAACCAACAGAACAGCTGGAGGGGTCGTCATGGAGGTCAGTGTGATGGGACGCAGCAGGGCTCTGTGCAGGGGCGTAATGTGAACACACAGGCCTCCCACGCTGGTGCGGCCAGCGCTCGCTCACAGCAGAACACACTgaagaggtcaaaggtcagacATGCCGACAACAGAGCATCTGCTGCAGCACACGGCTGCGGTGATGCTTCCCAGCCAATCATCATCTCTGACACTCCCAGTCCTGCCGTCAGCATCATCACCATCCACAGCGACACCGAGGACGAGGACGACAGGAAGATTCCTCCTGAGAGTGTGAACCAGCGCACAAACGTCATCAGCTGTGTGACTGTCCATGACTCGCAGGACTCTGACTCCTCCACCAGCACCCCTATTAGCCCCAAACGCCAATCCAGCTTTATCGAGAACAACACGCACTCCAAGTCTCTGGCCGTGGTGACTCCCTCAGTCAAAACACAGCTCTGGGATGCGGCGTCAGGAGAGCAAAGTACTAACAGTTCTGGAAAATCAAAGAAAGGAATGGCCTCCCAGTCCAGCGACCGGCATCAGAGAGCAGCATCAAACAGATCTCAGCCTCTCAACCTGAGCCAGGCACAGCAGTCTATGGGCGGACCTCTGAGACGACAGCCCACCTACCCACCAACAGGCCCCTCCCACTCCTACAGGCTTCATGAAGCGTCGCTTTTCGGCTCCGCCTCCAGTCTGTATGCATATCCGGCATCAGCAGCTCTGGCCTCAGTCTCTCAGGCAGTGGATCAGCTGCACAACTCCAGCTCCACCTCGTCCAGCAGACACACACGCACCGCCGGCCCATACTCAGCCTCCCTGAGTCTCCTGCAGAAAAACAGTGCCATGGGCGTCATGTGCCACGCTTCAGCCCCGTATCAGCAGCAGCTGTCACGGTCGGCAGCGTTCCCCCTCAGCCAGAGGAAACTCAACCAGTACCCCTACCTGTGA
>TCONS_00044473
GCATGTCCACACAAATGCAAGCCTTTTCCTCTCCCTCCGTGTCCTCCAGCGGCATATCCCGCTCCAAGAAACTGAAGGTGGAAAACCATGCATGGAACGTGAGCAACCAATCAGGCGAGAGCAGCTACTACCAGCACAGCCCCAGCCAAACCAACGGTTCCTCTCCTTCCACATCTGGATTCAACCCCAGCTACAACTCCTCCAGCCTGGTGTTTCCTCCACCCGGAGCATCGAGGGAGCAGACGGTGGTCCGCGCGGCGGACAGCACCGGCAGTGGCCCGGAGCCTTCATcatcctcctcatcatcatccACATCCAGCCACCGCGGAAAAGATGCGAGATCTAATTCTCTGACTTGCGAGGGCTATCAGAAACGGGCCAGTCTGAAGCGGAAGAGCGAGGAGGTGGACAGTAGTGACAGCGTGCAGATTTTGGAAGAGCTTTCAGCGCCTGTGCTCCCCAACCGCGTAGCCGGAGGTGGAGGAAACGCCACGGCTCAGTCCATCGCTCATTCCACGTCCACCACCAAAAGCAGCAACTCCCACAGCGAGGGCGACTACCAGCTGGTGCAGCACGAGATCCTCTGCTCCGTCTCCAACAGCTACGAGGTCCTGGAGTTCCTTGGCCGGGGAACTTTCGGACAGGTCGCCAAATGCTGGAAGCGGGGAACCAATGAGATCGTGGCCATTAAGATCCTCAAGAATCATCCTTCGTATGCGCGCCAGGGTCAGATAGAGGTGAGCATCCTCAGCCGTCTCAGCACAGAGAATGCAGACGAGTTCAACTTTGTGCGCTCCTACGAGTGTTTCCAGCACAAGAACCACACGTGTCTGGTGTTCGAGATGCTTGAGCAGAACCTCTACGACTTCCTCAAGCACAGTAAGTTCAGCCCGCTGCTCCTCAAGTGCATCCGGCCGGTTCTGCAGCAGGTATCGACAGCCTTGATGAAACTCAAGAGTCTGGGGCTTATCCACGCTGACCTAAAGCCTGAGAACATCATGCTGGTGGACCCCATCAGACAGCCCTACAGGGTCAAGGTCATCGACTTCGGTTCTGCCAGTCACGTCTCTAAGGCCGTGTGCTCAACTTACCTGCAGTCTAGATATTACCGAGCTCCAGAGATCATTCTGGGCCTTCCGTTCTGTGAGGCCATTGACATGTGGTCTCTGGGTTGTGTCATTGCTGAACTGTTCCTGGGCTGGCCTTTGTATCCAGGAGCTTCAGAATACGATCAGATTCGGTACATCTCCCAGACTCAAGGTTTGCCAGCGGAGTATCTCCTGAGCGCTGGCACTAAAACCAGCCGTTTCTTCCACAGAGGCCCAGACTCCAGCTACCCTCTCTGGAGACTGAAGACTCCCGCCGAGCACGAGGCTGAGTTTGGCATCAAGTCCAAAGAGGCTCGCAAATACATTTTCAACTGCCTCGATGACATGATGCAGGTCAATATGACTAACCTAGAGGGCACAGACATCTTAGCGGAGAAAGCTGACCGGAGAGAGTTTATCGACCTGCTAAAGAAAATGCTAACATTAGATGCGGACAAGAGAATAACACCCACCAAGACCCTCAACCACCCGTTTGTGACGATGACCCACCTGCTTCACTTCCCACACAGCTCTCATGTGAAATCCTGCTTCCAAAACATGGATATCTGCAAGCGCAGGTGCACCGCCTTCGACAACAACAAAAACCTATTCAGCAGCCACAATGGCCCGAGCGCAGCCGCCAACCTCACCGTCACGTTCAGCAGTCAACTCAATCAGCACAGCCAGATGGCCTCCACAGGGGGCCAGTCCCTGTCTCTTAGCAGCAACGTTCCTTTACTGAACTACCAGCCTGGTCTGTACCAGCAGGCCACTATAAATATCCCAGGCTTGGCTCAGCAGAGTGTGCCGCTGCAGGCTCGCCCTACTCAGCTGTGTGCCCAGACAGAGCCCTTCCAGCAAACCCTCATTGTGTGCCCTCCTACCATCCAGGGGCTGCAGACCTCCAACAAACACACTGGCTATCCTGTGAGAATGGACAACTCTGTGCCCATAGTGCCCCAAAACCAGTCCACACAGCCTCTGCATATTCAGCCCAGCATGTTGACACAGCAGGGCTGGCCAGCAGGTACCCAGCAGATCCTCATTCCCTCTTCATGGCAGCAGATGTCAGGCATGGCCATGCACAATCCCAGCCAGCCTGTCCTGTCCACAGATTCACCCATGAGCTCGCTGCTCTCAGACAACAGCAACCAACAGAACAGCTGGAGGGGTCGTCATGGAGGTCAGTGTGATGGGACGCAGCAGGGCTCTGTGCAGGGGCGTAATGTGAACACACAGGCCTCCCACGCTGGTGCGGCCAGCGCTCGCTCACAGCAGAACACACTgaagaggtcaaaggtcagacATGCCGACAACAGAGTCAGACCCACGTCCTCTCAGCAGCAGGCATCTGCTGCAGCACACGGCTGCGGTGATGCTTCCCAGCCAATCATCATCTCTGACACTCCCAGTCCTGCCGTCAGCATCATCACCATCCACAGCGACACCGAGGACGAGGACGACAGGAAGATTCCTCCTGAGAGCTGCAGTGTGAACCAGCGCACAAACGTCATCAGCTGTGTGACTGTCCATGACTCGCAGGACTCTGACTCCTCCACCAGCACCCCTATTAGCCCCAAACGCCAATCCAGCTTTATCGAGAACAACACGCACTCCAAGTCTCTGGCCGTGGTGACTCCCTCAGTCAAAACACAGCTCTGGGATGCGGCGTCAGGAGAGCAAAGTACTAACAGTTCTGGAAAATCAAAGAAAGGAATGGCCTCCCAGTCCAGCGACCGGCATCAGAGAGCAGCATCAAACAGATCTCAGCCTCTCAACCTGAGCCAGGCACAGCAGTCTATGGGCGGACCTCTGAGACGACAGCCCACCTACCCACCAACAGGCCCCTCCCACTCCTACAGGCTTCATGAAGCGTCGCTTTTCGGCTCCGCCTCCAGTCTGTATGCATATCCGGCATCAGCAGCTCTGGCCTCAGTCTCTCAGGCAGTGGATCAGCTGCACAACTCCAGCTCCACCTCGTCCAGCAGACACACACGCACCGCCGGCCCATACTCAGCCTCCCTGAGTCTCCTGCAGAAAAACAGTGCCATGGGCGTCATGTGCCACGCTTCAGCCCCGTATCAGCAGCAGCTGTCAGCACAGTCGTACCAGCGGTCGGCAGCGTTCCCCCTCAGCCAGAGGAAACTCAACCAGTACCCCTACCTGTGA
>TCONS_00044474
CCAATCATCATCTCTGACACTCCCAGTCCTGCCGTCAGCATCATCACCATCCACAGCGACACCGAGGACGAGGACGACAGGAAGATTCCTCCTGAGAGCTGCAGTGTGAACCAGCGCACAAACGTCATCAGCTGTGTGACTGTCCATGACTCGCAGGACTCTGACTCCTCCACCAGCACCCCTATTAGCCCCAAACGCCAATCCAGCTTTATCGAGAACAACACGCACTCCAAGTCTCTGGCCGTGGTGACTCCCTCAGTCAAAACA
>TCONS_00044476
ATGTCCACACAAATGCAAGCCTTTTCCTCTCCCTCCGTGTCCTCCAGCGGCATATCCCGCTCCAAGAAACTGAAGGTGGAAAACCATGCATGGAACGTGAGCAACCAATCAGGCGAGAGCAGCTACTACCAGCACAGCCCCAGCCAAACCAACGGTTCCTCTCCTTCCACATCTGGATTCAACCCCAGCTACAACTCCTCCAGCCTGGTGTTTCCTCCACCCGGAGCATCGAGGGAGCAGACGGTGGTCCGCGCGGCGGACAGCACCGGCAGTGGCCCGGAGCCTTCATcatcctcctcatcatcatccACATCCAGCCACCGCGGAAAAGATGCGAGATCTAATTCTCTGACTTGCGAGGGCTATCAGAAACGGGCCAGTCTGAAGCGGAAGAGCGAGGAGGTGGACAGTAGTGACAGCGTGCAGATTTTGGAAGAGCTTTCAGCGCCTGTGCTCCCCAACCGCGTAGCCGGAGGTGGAGGAAACGCCACGGCTCAGTCCATCGCTCATTCCACGTCCACCACCAAAAGCAGCAACTCCCACAGCGAGGGCGACTACCAGCTGGTGCAGCACGAGATCCTCTGCTCCGTCTCCAACAGCTACGAGGTCCTGGAGTTCCTTGGCCGGGGAACTTTCGGACAGGTCGCCAAATGCTGGAAGCGGGGAACCAATGAGATCGTGGCCATTAAGATCCTCAAGAATCATCCTTCGTATGCGCGCCAGGGTCAGATAGAGGTGAGCATCCTCAGCCGTCTCAGCACAGAGAATGCAGACGAGTTCAACTTTGTGCGCTCCTACGAGTGTTTCCAGCACAAGAACCACACGTGTCTGGTGTTCGAGATGCTTGAGCAGAACCTCTACGACTTCCTCAAGCACAGTAAGTTCAGCCCGCTGCTCCTCAAGTGCATCCGGCCGGTTCTGCAGCAGGTATCGACAGCCTTGATGAAACTCAAGAGTCTGGGGCTTATCCACGCTGACCTAAAGCCTGAGAACATCATGCTGGTGGACCCCATCAGACAGCCCTACAGGGTCAAGGTCATCGACTTCGGTTCTGCCAGTCACGTCTCTAAGGCCGTGTGCTCAACTTACCTGCAGTCTAGATATTACCGAGCTCCAGAGATCATTCTGGGCCTTCCGTTCTGTGAGGCCATTGACATGTGGTCTCTGGGTTGTGTCATTGCTGAACTGTTCCTGGGCTGGCCTTTGTATCCAGGAGCTTCAGAATACGATCAGATTCGGTACATCTCCCAGACTCAAGGTTTGCCAGCGGAGTATCTCCTGAGCGCTGGCACTAAAACCAGCCGTTTCTTCCACAGAGGCCCAGACTCCAGCTACCCTCTCTGGAGACTGAAGACTCCCGCCGAGCACGAGGCTGAGTTTGGCATCAAGTCCAAAGAGGCTCGCAAATACATTTTCAACTGCCTCGATGACATGATGCAGGTAGTCAATATGACTAACCTAGAGGGCACAGACATCTTAGCGGAGAAAGCTGACCGGAGAGAGTTTATCGACCTGCTAAAGAAAATGCTAACATTAGATGCGGACAAGAGAATAACACCCACCAAGACCCTCAACCACCCGTTTGTGACGATGACCCACCTGCTTCACTTCCCACACAGCTCTCATGTGAAATCCTGCTTCCAAAACATGGATATCTGCAAGCGCAGGTGCACCGCCTTCGACAACAACAAAAACCTATTCAGCAGCCACAATGGCCCGAGCGCAGCCGCCAACCTCACCGTCACGTTCAGCAGTCAACTCAATCAGCACAGCCAGATGGCCTCCACAGGGGGCCAGTCCCTGTCTCTTAGCAGCAACGTTCCTTTACTGAACTACCAGCCTGGTCTGTACCAGCAGGCCACTATAAATATCCCAGGCTTGGCTCAGCAGAGTGTGCCGCTGCAGGCTCGCCCTACTCAGCTGTGTGCCCAGACAGAGCCCTTCCAGCAAACCCTCATTGTGTGCCCTCCTACCATCCAGGGGCTGCAGACCTCCAACAAACACACTGGCTATCCTGTGAGAATGGACAACTCTGTGCCCATAGTGCCCCAAAACCAGTCCACACAGCCTCTGCATATTCAGCCCAGCATGTTGACACAG

Function

symbol description
hipk1a Predicted to enable protein serine/threonine kinase activity and protein tyrosine kinase activity. Predicted to be involved in intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; protein phosphorylation; and smoothened signaling pathway. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in PML body and cytoplasm. Is expressed in female organism. Orthologous to human HIPK1 (homeodomain interacting protein kinase 1).

GO:

id name namespace
GO:0018105 peptidyl-serine phosphorylation biological_process
GO:0018107 peptidyl-threonine phosphorylation biological_process
GO:0007224 smoothened signaling pathway biological_process
GO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0016605 PML body cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081031-101 Predicted to enable protein serine/threonine kinase activity and protein tyrosine kinase activity. Predicted to be involved in intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; protein phosphorylation; and smoothened signaling pathway. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in PML body and cytoplasm. Is expressed in female organism. Orthologous to human HIPK1 (homeodomain interacting protein kinase 1).

Ensembl:

ensembl_id ENSDARG00000063594

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044472 False 3282 mRNA 0.56 19 36816486 36857964
TCONS_00044473 False 3257 mRNA 0.56 15 36816486 36857966
TCONS_00044474 False 267 mRNA 0.55 2 36822373 36823932
TCONS_00044476 True 2100 mRNA 0.55 9 36842395 36857964

Neighbor

gene id symbol gene type direction distance location
XLOC_022547 CU571398.1 coding downstream 61801 36711024 ~ 36754685 (-)
XLOC_022546 agap2 coding downstream 91911 36675207 ~ 36724575 (-)
XLOC_022548 BX321896.1 coding downstream 97991 36718375 ~ 36718495 (-)
XLOC_022545 zbtb39 coding downstream 146117 36660750 ~ 36670369 (-)
XLOC_022544 NA coding downstream 207703 36605744 ~ 36608783 (-)
XLOC_022551 NA coding upstream 10079 36868045 ~ 36869244 (-)
XLOC_022552 ube2j2 coding upstream 12388 36870354 ~ 36884290 (-)
XLOC_022553 acap3a coding upstream 30947 36888913 ~ 36934944 (-)
XLOC_022554 CABZ01054876.1 coding upstream 101825 36959791 ~ 36959912 (-)
XLOC_022555 NA coding upstream 139238 36997204 ~ 37000484 (-)
XLOC_022543 FO704757.2 non-coding downstream 306367 36509997 ~ 36510119 (-)
XLOC_022538 BX571773.1 non-coding downstream 494362 36322010 ~ 36322124 (-)
XLOC_022535 NA non-coding downstream 537890 36110214 ~ 36278596 (-)
XLOC_022558 CR762407.1 non-coding upstream 419107 37277073 ~ 37280713 (-)
XLOC_022562 NA non-coding upstream 665571 37523537 ~ 37525054 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_01878297_01894123 HIPK1A coding CI01000001 null 1878297 ~ 1896084 (+)