XLOC_022555


Basic Information

Item Value
gene id XLOC_022555
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36997204 ~ 37000484 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044748
atttttggtaacactttacaccatttactactggccAATTACCTCcttgttattaagatattaactgctTATTAGCaatttaaaagtgtttatttttcatccctaatcctacccagtacctaaacccaactgcaatcttacttactattaataagcagctaattagtagtgtGTATTGAGCTAAAAATCATAGCTAATAGTTTGTTGATAGCGTGAGTTAAAATAAAGTATGATCTCATTTTAACTGTTTCATTTTAAGTTGAAGTAACACTCCATGCCTGTTTTTGACCGTTAAACCGTAAATATCCTCCATTAATCGCCAGCAGGGGCATATGAAGGTGAATGAGACTCTCTAATTCATGCTAATCAGACGTAACTCATGAGGTAGTGGCGATGATGTCATTAGTCTTTTGTGCTCAGCCTGTGTGAAGTCCGCCGGTTCTTCCTGTCCACAAAAGCTGAATAGCcgctccattcacacacacaaaaaagctgGGCATTCTGAGCCGTTTGTAAAGCACTTCTAAGCAACATCCTGGAAGTGTGAAGACTGTAAGAGAGTGCAAAGGGTTTATTAAGTGAAAGGGAATCGAATAACCCGGCCGTATGACTCAGTTTGCTTCCTTTGAGATGTTTGGGTCCTGTTTGGCTACTGATGCGATTCTGCTGTTAAGAGTTTCCCATGAAGCCCCCCTGTTGACAGATGCAGCGGTCTTTCTCCACAGGAAGAACAACATGAAGCGCTTCATTCAATGCTGAGGCGTTTCCTTCCAATCCTTCAGATATTCAGCATTTCTCAAAGCACTTGTAAACAGCCTCCGATCCCTCCAAACACAGTCAAAAGCCTGCTAGCGTGACGGAGCAGGTGGATGTAATGGTACTCAATTAGGATTATGGTCCCCGACCCACTGCCAGCTCTGCTTCTACTGACCCGCACAGCGTTCACAAGTTCACAGCGGGAGGCCAGCGTCTCAGCAGGGGGCTCGTCATTCTGCTAATCTCTTATGATTCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044748 True 1013 lncRNA 0.43 2 36997204 37000484

Neighbor

gene id symbol gene type direction distance location
XLOC_022554 CABZ01054876.1 coding downstream 37292 36959791 ~ 36959912 (-)
XLOC_022553 acap3a coding downstream 62260 36888913 ~ 36934944 (-)
XLOC_022552 ube2j2 coding downstream 112914 36870354 ~ 36884290 (-)
XLOC_022551 NA coding downstream 127960 36868045 ~ 36869244 (-)
XLOC_022549 hipk1a coding downstream 139238 36816486 ~ 36857966 (-)
XLOC_022556 ints11 coding upstream 57119 37057603 ~ 37085968 (-)
XLOC_022557 zgc:193690 coding upstream 95308 37095792 ~ 37113430 (-)
XLOC_022558 CR762407.1 coding upstream 276589 37277073 ~ 37280713 (-)
XLOC_022559 mul1b coding upstream 287058 37287542 ~ 37291840 (-)
XLOC_022560 zmp:0000001088 coding upstream 412316 37412800 ~ 37432459 (-)
XLOC_022550 CR926464.2 non-coding downstream 168616 36828472 ~ 36828588 (-)
XLOC_022548 BX321896.1 non-coding downstream 278709 36718375 ~ 36718495 (-)
XLOC_022544 NA non-coding downstream 388421 36605744 ~ 36608783 (-)
XLOC_022562 NA non-coding upstream 523053 37523537 ~ 37525054 (-)
XLOC_022566 NA non-coding upstream 720900 37721384 ~ 37724683 (-)
XLOC_022568 CU682811.2 non-coding upstream 1096336 38096820 ~ 38099972 (-)
XLOC_022569 CU682811.1 non-coding upstream 1126968 38127452 ~ 38127569 (-)

Expression


Co-expression Network