XLOC_022560 (zmp:0000001088)


Basic Information

Item Value
gene id XLOC_022560
gene name zmp:0000001088
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 37412800 ~ 37432459 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044493
AtgaatctgctgctgctgctgctctgtgTCCTGCTGGAGATCCTGGCCGTCAGCTgtcAGGATGTGATACAGGCCCGTATCGTGGGTGGATACGTTCCTGCACCATACTCCATCAAGTACATCGTGTCAATTCAGAGTGCCACGGGCCAGCACTTCTGTGGCGGGACTTTAATTAACAAATACTGGGTGCTGACCGCAGCACACTGCAACATAGGGGAAGCCAACATGAGGATCGTGGCTGGAGATTATTCAGTGGGATTATATGAGGGGATGGAGCAGTTTCGCAGGCCTCATATGTTGATACCTCACCCACAATACGACAGAAGCACCAATAACGCAGACATCATGCTCATTAAGCTGCAGTCTCCAGTCTATCTGAACAGCTACGTGTCTCTGGTGCCGCTGCCACGTCAGGACGCAATGGTGGCCGTGGGTCGCCTATGCAGCGTCTCCGGCTGGGGCTTTACCACTTCAACCGGAGGCATCTCTTCAATCCTGCGCACAGTAAAGCTGCCCATCGTGTCCACCGCTGTGTGTAACGGCACAGACTCATTCAATGGAAACATCACCGAGAACATGATCTGTGCAGGATACAGTACAGGAGGAAAAGACGCATGCAAGGGGGATTCTGGAGGGCCTCTGGTGTGCGAGGGCCGCGTCTATGGCATTGTGTCCTGGGGCAATGGCTGCGCTGATGCCCAGTATCCCGGCGTCTACACCGCAGTCTCACAGTTTCGCCAATGGATTGATGCCACTATATTTGGCTTCTATGGAAGATGCCTTACGGACTAAACCTCAGTGTTACCTCAGCACTCCCCCAAAACAAACTTGAAACATGCCAACTTTTACAAGCTTACATCTATTTGGAAAAGTTAGGACCTCTGATGAAGTTCAGACAAGAAACACTGCTGTTCGGAAACGGCACATCTGTTCCTCAACGGCTggtagagattttttttaaacacagtagTTTGTATGTTCGGTAAATGTGCCATATTGCTGCTTCTCTGTAAAGTTGCTGAAAACTAACCTTAGGAGGCTGAAGGaatgttttctgaaaaacacAACAACCACAAATTATATTAAGTGGAATGGTACATGTAAGCAGGGGCAGACTTAACCAATAAGagaggtaagcagccgcttagggcgaATTAGGGGGCCCCAATGTCAAGAAGCCTACTgtatattaatcatatagctcttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgagctatatgattaatatataGTATCATAATATAGTATCATAAAGTATACTGTAGAATCTGGTTTTAATTattaagattttaatgttattactgAATTTATTgtacttaattttaaattaagaagATAAAGGTTGTTTATTTactaaaacaacaataacaacaacaacaacaacaacactaatcaatagaaaaaaataaatatctatatagTTTTGAGTTTCAATGCTTCGGCCCCATAAcaggaattgcttagggcccccaaatcaagTCCACCCCTGCATGTGAGtaactttttaactttaaaattaatGCAATCAAATAGATTTTGATTTGAACCCTAAAAATCCACTTATATACTTTcaaagattttttatatatatatatatatatatatatatatatatatatatataaaaaagagaaaagtgtGTTGTCACACctgtataattttacaaaatgtttacaaatttaacaaaatattaacaaaagtatatattataaagatatatatttgATAATAAGAAaccttggtaacactttacattaaggttgtattagttaaagcatgtactaacatgaacaaacaatgaacaatactacAGTGGTTGTTCAATTTTgataaatgaaaatacagttgttcattcaGTTAACCCAAGGtgtattaactaacgttaacataaatgcattttattactaaatgttgaactatgatcaataaatgctgtacaaacaTTGTTCATAAAtagttcatgtaagtaaatacattaactaatgaaaccttactgtaaaTTGTGATTGACACCTTTCCTAAAAACATATAAGAACATACATAAACGTATAAGATTTTTGAGGGATCATACTTATGACTTGATTGCatgaataaattagattttaaaatatgtatttaaatgctAAACTATGTATTACATATACTACAATGAAAAAGagatgttttgtaatattttaattttttatattttttaaaagtgtattatcATACTTTTACTGTTTGTAAtgtattttggttaaataaatgCAGACTTGGTGAGCACAGAAGACTTATCATTTGTACACTGTTTTACCAGGTTATGGACAACATATTTTACCATTTCACCATAATAGTCATTATggtctaatataataataagagtATACCAATAATTTGATATGTTATGATATGAAAATATTTGTCCAAGCTACAACATACATCCTAAAAATCTGGAATTTGAGGGTTGAAAAAAAGTATAGCTCTTAGCCATACCGGCATAGAAAATagtaacttttcatttttggtCTTAGTTCACAGTGCAACTACGtacaaaagagtcaagctttCAAATAGACAAATAattgaaactctttggtcatttttgagtgagatgctaatggcctaatctgattcaatgcATTCAATGCTAAGCTAAACGTGCTTCTGCCAGACCTGGAAAtaggctgaatggattaaaaaaatgttttaatctcATCTGTTTAACTTTATGTAAATAGTAAAATGAGCCTATATAAAAACTCACTTTGGTTATGAAGCGTTTGGAAACACTCAGGGCTTAAGCTGTGCCAGAGCAcgccggatccggcacctctgaaatctgatccagcacctcattttaccattCCCCTTCCTCAATCTGCATCTCTAgtctagcaaagtgctatgcaggtaaacctcactcctctgaccttacAAGATGCTCCAGCGACacgccatggtctttagcctccttgttagagcaaccgactcccataaaaagaatcgctggttcgattccagctcagaccagattgggtgcagtaggaccggtggatTACATTTGGGGTCTTGTCCAAATGGGAGTGAAGTATAAGGGactgtgtaacagaggccagctagcaaagtgcaaTGTGAATAAATCTCACTCCTccgacctcaaaaggtgctctagcgacagacaacttagaggccatggtctttagcctccttgctaGAATAACCGACTCCCATAGAAAAAATTGCCAGTTCGATTCCAGCTGAGATCAGGTTGGGTGCAATAGGACTAATGGGTTACAATGGTAACATCGgtaaagccgtccacatggaggtaggTGGTCAGCGTGAACAGAAACAGAAGCTGTtggcggcatcataccaccctgcAGCATTAATTTTAAAGACCAAATGCAGCCTTATGCACctatggctacataatttgcgctctccagaaatgtgtacagGGGTaggttttcacaatgagcctgtgttggccaTTGTTGTGTATATTTGTTTGTCCTTGCCTTTAATCTACACACTCCCCTAAACGATGTACCGTATGTGAATGACATTATCATTTTCaaagacttttgtttttgaatgtttacA

Function

symbol description
zmp:0000001088 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005615 extracellular space cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-140106-48 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space.

Ensembl:

ensembl_id ENSDARG00000116457

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044493 True 3663 mRNA 0.38 5 37412800 37432459

Neighbor

gene id symbol gene type direction distance location
XLOC_022559 mul1b coding downstream 120960 37287542 ~ 37291840 (-)
XLOC_022558 CR762407.1 coding downstream 132087 37277073 ~ 37280713 (-)
XLOC_022557 zgc:193690 coding downstream 299370 37095792 ~ 37113430 (-)
XLOC_022556 ints11 coding downstream 326832 37057603 ~ 37085968 (-)
XLOC_022555 NA coding downstream 412316 36997204 ~ 37000484 (-)
XLOC_022561 dnajc16 coding upstream 61073 37493532 ~ 37514493 (-)
XLOC_022562 NA coding upstream 91078 37523537 ~ 37525054 (-)
XLOC_022563 tor1l1 coding upstream 98259 37530718 ~ 37536127 (-)
XLOC_022564 tor1l2 coding upstream 106609 37539068 ~ 37546696 (-)
XLOC_022565 tor1l3 coding upstream 133638 37566097 ~ 37575030 (-)
XLOC_022554 CABZ01054876.1 non-coding downstream 452888 36959791 ~ 36959912 (-)
XLOC_022551 NA non-coding downstream 543556 36868045 ~ 36869244 (-)
XLOC_022550 CR926464.2 non-coding downstream 584212 36828472 ~ 36828588 (-)
XLOC_022566 NA non-coding upstream 288925 37721384 ~ 37724683 (-)
XLOC_022568 CU682811.2 non-coding upstream 664361 38096820 ~ 38099972 (-)
XLOC_022569 CU682811.1 non-coding upstream 694993 38127452 ~ 38127569 (-)
XLOC_022573 NA non-coding upstream 1040675 38473134 ~ 38647152 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_01589727_01595957 NA coding CI01000001 null 1589727 ~ 1596289 (+)