XLOC_022561 (dnajc16)


Basic Information

Item Value
gene id XLOC_022561
gene name dnajc16
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 37493532 ~ 37514493 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044494
ATGCGGACGGTGGTGGGGTTGCTCTCTGTGATTATGCTGTATGTGCTCCTGAATGATGCTACGGTGGAAAGCACTGCAGAATTTGATCCATATAAGGTTTTAGGAGTCACCAGAAGTGCAAGCCAAGCAGAAATCAAGAAAGTCTACAAACGCCTGGCCAAAGAATGGCATcctgataaaaacaaaaatcctGAAGCAGAAGACATGTTCATCAAGATTACAAAGTCTTATGAGATCTTAACAAATGAGGAGAAGAGAGCCAGTTACGATCGCTATGGACAAACAGATGATACTCAACCGTATGGCCACCGTCATCACGGATTCCGGCACTTTCATGACAACTTCTACTTCGACGAGTCTTTCTTCCACTTTCCCTTCAACAATAAGGGAGGCCGGGACTTCGCTGACAGCAAGTACACGTTGCACTTCAACCAGTATGTCAACGAAGTCGTTCCCGACAGCTTCAAGAGGCCTTACTTGATCAAGATAACCTCAGATTGGTGCTTCAGCTGCATACATATCGAGCCAGTCTGGAAAGAAACAGTGCAGGAGTTGGAAACTCTGGGAATTGGGATTGGTGTGGTTGATGTCGGATACGAGCGACGTTTAGCAAATCACTTGGGCGCACATCAGACTCCATCCATCCTTGGTGTCGTCAATGGAAAAGTCTCTTTCTTTCATTACGCTGTCGTCAAAGAACACTTGATACAGTTTGTAGATGACTTGCTGCCACAAAGACTAATTGAAAAGGTTACAGATAAGAACAACCACGAGTTTCTGAAGAGCTGGCATGAGCTGAACAAGCCACATGTACTCCTGTTTGACCAAGTGCCTTCTGTTCCTCTGCTTTATAAGCTTACAGCGTTTGCCTTCAAGGATTATGTGCAGTTTGGATATGTAGATCAAGGTCTTTCTGAGACTGCTGAGCTGCTCAGAAAGTTCAATATAAACACTTATGCGCCGACCATGCTGGTTTTCAAAGAGGACGTGGAGAAGCCTGCCGACATAATACAGGCTAAAGGGATGAAGAAGCAGATAATAGACGAGTTCATCTCCAACAACAAGTTCCTCCTGGCTCCTCGTCTGGTTAATCAAAAGCTATTCGACGAGCTTTGTCCTGTCAAACAGTTCCATCGACGCAGGAAATATTGCATTCTACTCATCACTGGTGAAGACGAGTCCTACATCCCTGGAAATGAAGCCTTCCTCTTGCTAGCCTCTGCTAATGCTAATGACGTACTGCGGTTTGCATACGTTTACCATCGACGTCAACAGCCTCTATGTGACATTCTGCTAAAGGACAAAGATGACACAGCACCACAGCAGGTGGTGATTTTAGAGAGGCGCAACGGGGCTGGAAAGATTCTTTATAAGCCGTTATTGGGAGGATGGAACGGCAGTAAGGAGGACAAACACAAACTCCTGGAGGAGCTGCAAAGACTGCAGAAAGATCCCTCCATCCTCAACTACAATGCCATCCTGCCAGAGCTCAACAATGAGTTTGCTTCTATGTTTTTAGTGAGATGGATTTACACGGCATATGATTACTTGTCTGAAATTATCGACGACCTTCTTCATAATAACTGGCGTGAGATGATGCCCCTTCTGTCCTTGATATTCTCTGCactctttattttatttggcACTGTAGTTATTCAAGCTTTCAGTGACTCAAGTGAGGAAAAACAGcccaaaatgaaagtgaaagagaCAAAGAGCGAGAACGGTTCGCCAAACACCTCCAACGCATCCAGTCGGCCACCAAAGAAGAACTTTGTGGAGGTGACAGAGTTGACTGACATCACTTATACCAGTAACCTGGTGAAGCTGAGGCCGGGTCACATTAATGTAGTGCTGGTTCTTACTGATGGCACCAAAAACATCCTGCTCAGCAAGTTTGCCAAGGAGGTTTATTCATTCACCGGGAGTTTGACGCTCCACTTCTCCTTCCTGAATGTGGATAAACACAAAGAATGGATGGCAGCGGTGCTGGAATTTGCCCAGGACGCCATGCAGATCGACACAGATGAGGATGAAATGGGCACTCGTAAAGTCGACTACACTGGCTATGTCCTAGCGCTCAATGGCCATAAGAAATACCTGTGTCTCTTTAAGCCAGTCTACACGGGAGAAGACTTGGATGGAAAAGCAGAAGAGGAAGGAGGAGTATCGCGATCCAGAAAAAGCACGACACGTTCTCGATCCACATCTCTTCAGATCCACCACAAACTGGACCGACTCGGCCTATGGATGGAGCGGCTGATGGAAGGGACTCTGCCCCGATACTATGTCCCAGCCTGGCCCGGTCTGGATAAGATCACCAGTTTTTGCCTCATGACGTCAACGTGA

Function

symbol description
dnajc16 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DNAJC16 (DnaJ heat shock protein family (Hsp40) member C16).

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
ko03110 Chaperones and folding catalysts

ZFIN:

id description
ZDB-GENE-130530-683 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DNAJC16 (DnaJ heat shock protein family (Hsp40) member C16).

Ensembl:

ensembl_id ENSDARG00000059699

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044494 True 2349 mRNA 0.46 15 37493532 37514493

Neighbor

gene id symbol gene type direction distance location
XLOC_022560 zmp:0000001088 coding downstream 61073 37412800 ~ 37432459 (-)
XLOC_022559 mul1b coding downstream 201692 37287542 ~ 37291840 (-)
XLOC_022558 CR762407.1 coding downstream 212819 37277073 ~ 37280713 (-)
XLOC_022557 zgc:193690 coding downstream 380102 37095792 ~ 37113430 (-)
XLOC_022556 ints11 coding downstream 407564 37057603 ~ 37085968 (-)
XLOC_022562 NA coding upstream 9044 37523537 ~ 37525054 (-)
XLOC_022563 tor1l1 coding upstream 16225 37530718 ~ 37536127 (-)
XLOC_022564 tor1l2 coding upstream 24575 37539068 ~ 37546696 (-)
XLOC_022565 tor1l3 coding upstream 51604 37566097 ~ 37575030 (-)
XLOC_022566 NA coding upstream 206891 37721384 ~ 37724683 (-)
XLOC_022555 NA non-coding downstream 493048 36997204 ~ 37000484 (-)
XLOC_022554 CABZ01054876.1 non-coding downstream 533620 36959791 ~ 36959912 (-)
XLOC_022551 NA non-coding downstream 624288 36868045 ~ 36869244 (-)
XLOC_022550 CR926464.2 non-coding downstream 664944 36828472 ~ 36828588 (-)
XLOC_022568 CU682811.2 non-coding upstream 582327 38096820 ~ 38099972 (-)
XLOC_022569 CU682811.1 non-coding upstream 612959 38127452 ~ 38127569 (-)
XLOC_022573 NA non-coding upstream 958641 38473134 ~ 38647152 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_01545235_01551987 DNAJC16 coding CI01000001 null 1545235 ~ 1552023 (+)