Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_022565 |
| gene name | tor1l3 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 37566097 ~ 37575030 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| tor1l3 | Predicted to enable kinesin binding activity. Predicted to be involved in nuclear membrane organization and protein localization to nucleus. Predicted to act upstream of or within chaperone cofactor-dependent protein refolding and endoplasmic reticulum organization. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum lumen and nuclear envelope. |
| id | name | namespace |
|---|---|---|
| GO:0045104 | intermediate filament cytoskeleton organization | biological_process |
| GO:0048489 | synaptic vesicle transport | biological_process |
| GO:0034504 | protein localization to nucleus | biological_process |
| GO:0006998 | nuclear envelope organization | biological_process |
| GO:0061077 | chaperone-mediated protein folding | biological_process |
| GO:0051085 | chaperone cofactor-dependent protein refolding | biological_process |
| GO:0071763 | nuclear membrane organization | biological_process |
| GO:0031175 | neuron projection development | biological_process |
| GO:0007155 | cell adhesion | biological_process |
| GO:0072321 | chaperone-mediated protein transport | biological_process |
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0005788 | endoplasmic reticulum lumen | cellular_component |
| GO:0005635 | nuclear envelope | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0019894 | kinesin binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| GO:0051082 | unfolded protein binding | molecular_function |
| GO:0008092 | cytoskeletal protein binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1859 | Predicted to enable kinesin binding activity. Predicted to be involved in nuclear membrane organization and protein localization to nucleus. Predicted to act upstream of or within chaperone cofactor-dependent protein refolding and endoplasmic reticulum organization. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum lumen and nuclear envelope. |
| ensembl_id | ENSDARG00000026895 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00044497 | True | 1308 | mRNA | 0.41 | 5 | 37566097 | 37575030 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_022564 | tor1l2 | coding | downstream | 19401 | 37539068 ~ 37546696 (-) |
| XLOC_022563 | tor1l1 | coding | downstream | 29970 | 37530718 ~ 37536127 (-) |
| XLOC_022562 | NA | coding | downstream | 41043 | 37523537 ~ 37525054 (-) |
| XLOC_022561 | dnajc16 | coding | downstream | 51604 | 37493532 ~ 37514493 (-) |
| XLOC_022560 | zmp:0000001088 | coding | downstream | 133638 | 37412800 ~ 37432459 (-) |
| XLOC_022566 | NA | coding | upstream | 146354 | 37721384 ~ 37724683 (-) |
| XLOC_022567 | cd40 | coding | upstream | 248530 | 37823560 ~ 37835794 (-) |
| XLOC_022568 | CU682811.2 | coding | upstream | 521790 | 38096820 ~ 38099972 (-) |
| XLOC_022569 | CU682811.1 | coding | upstream | 552422 | 38127452 ~ 38127569 (-) |
| XLOC_022570 | pfdn4 | coding | upstream | 576363 | 38151393 ~ 38160024 (-) |
| XLOC_022558 | CR762407.1 | non-coding | downstream | 285384 | 37277073 ~ 37280713 (-) |
| XLOC_022555 | NA | non-coding | downstream | 565613 | 36997204 ~ 37000484 (-) |
| XLOC_022554 | CABZ01054876.1 | non-coding | downstream | 606185 | 36959791 ~ 36959912 (-) |
| XLOC_022551 | NA | non-coding | downstream | 696853 | 36868045 ~ 36869244 (-) |
| XLOC_022573 | NA | non-coding | upstream | 898104 | 38473134 ~ 38647152 (-) |
| XLOC_022574 | NA | non-coding | upstream | 1228843 | 38803873 ~ 38807512 (-) |
