XLOC_022577



Basic Information


Item Value
gene id XLOC_022577
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 39011955 ~ 39012362 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044753
tatgctatataagcattctgctgtggcgaccccagattaacaaaaggactaagccaaaaagaaaattaatgaataatatgatatgatatgatatatgatacaatacaacacaacacaatataATATGTGATGTTGAAGCTCAaaacccataatatatatatttttaattgagaCTACAGTcaaaaaactatggaagtcaatagttaccagttttcaacattcttcaaaatatctctttttgtgttcaaaaaagtgGAGGTCgagtaaaatgatgacagaactttcaattttgggtgaattatcccttttacTTAAACAAGTACAGGTTTTGATGTCAAAAACATATTACTGGTttacatatactataaaaataaGCTTATCATAAAGTTGATACGACTAAGGTggtta

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044753 True 408 lncRNA 0.29 1 39011955 39012362

Neighbor


gene id symbol gene type direction distance location
XLOC_022576 NA coding downstream 62045 38947827 ~ 38949910 (-)
XLOC_022575 NA coding downstream 147100 38859575 ~ 38864855 (-)
XLOC_022574 NA coding downstream 204443 38803873 ~ 38807512 (-)
XLOC_022573 NA coding downstream 364803 38473134 ~ 38647152 (-)
XLOC_022572 tshz2 coding downstream 514199 38379627 ~ 38497756 (-)
XLOC_022578 NA coding upstream 402668 39415030 ~ 39455122 (-)
XLOC_022579 NA coding upstream 515608 39527970 ~ 39534894 (-)
XLOC_022580 vwa1 coding upstream 620035 39632397 ~ 39666658 (-)
XLOC_022581 htr6 coding upstream 718603 39730965 ~ 39738055 (-)
XLOC_022582 micos10 coding upstream 732007 39744369 ~ 39751234 (-)
XLOC_022569 CU682811.1 non-coding downstream 884386 38127452 ~ 38127569 (-)
XLOC_022586 NA non-coding upstream 927878 39940240 ~ 39942116 (-)
XLOC_022587 CU657980.2 non-coding upstream 932290 39944652 ~ 39945578 (-)
XLOC_022588 CU657980.1 non-coding upstream 939191 39951553 ~ 39952406 (-)

Expression



Co-expression Network