XLOC_022578



Basic Information


Item Value
gene id XLOC_022578
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 39415030 ~ 39455122 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00045099
ACGGTTCCATTTTTGATGAGGAACATTTCTAATAAAATCTCTCGTGCACAGATTTGAGCTTTTAGAAACAAAGTTtattgcacttaaaaaaaaaaagataacaccatgtcatacatttttaaagtacaaATTGAATTTCAGTGTTATTTCAAATAGTTTGAAAGGGGGCATTGCAGTATTGTACATTGGAAATCAATTGTGAGCAACTGCAGTTAAAATATCCACAAAGCTCATAGAAAACAACTGCATAGTTTGAACGCATTAGATGGGGATGCACTAATAATGTGTTTACTTGTAGATCTGATTTGATTTCTGCTGACTTTTCTTTTTCCAGTTCTTAAACACACGATTCATCATTTCATCAAGGACCATAAACCTGCCGTCATCCATCAACCATCAAATCTCCTGCAGAAAAAGACCAAAAAAGGAATCAGGAGAACA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00045099 True 441 lncRNA 0.34 2 39415030 39455122

Neighbor


gene id symbol gene type direction distance location
XLOC_022577 NA coding downstream 402668 39011955 ~ 39012362 (-)
XLOC_022576 NA coding downstream 465120 38947827 ~ 38949910 (-)
XLOC_022575 NA coding downstream 550175 38859575 ~ 38864855 (-)
XLOC_022574 NA coding downstream 607518 38803873 ~ 38807512 (-)
XLOC_022573 NA coding downstream 767878 38473134 ~ 38647152 (-)
XLOC_022579 NA coding upstream 72848 39527970 ~ 39534894 (-)
XLOC_022580 vwa1 coding upstream 177275 39632397 ~ 39666658 (-)
XLOC_022581 htr6 coding upstream 275843 39730965 ~ 39738055 (-)
XLOC_022582 micos10 coding upstream 289247 39744369 ~ 39751234 (-)
XLOC_022583 SIKE1 coding upstream 300519 39755641 ~ 39772107 (-)
XLOC_022586 NA non-coding upstream 485118 39940240 ~ 39942116 (-)
XLOC_022587 CU657980.2 non-coding upstream 489530 39944652 ~ 39945578 (-)
XLOC_022588 CU657980.1 non-coding upstream 496431 39951553 ~ 39952406 (-)
XLOC_022593 NA non-coding upstream 923531 40378653 ~ 40407945 (-)

Expression



Co-expression Network