XLOC_022585 (ppp1r14c)


Basic Information

Item Value
gene id XLOC_022585
gene name ppp1r14c
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 39807857 ~ 39849155 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044514
AAATGCTCGCGCTGGGCTTTAAATAGCAGGTGTGAGAAAACCGTGTCCTTGCATATACACCCGTCAGACACACcaccatcatcataatcatcGCCATCATGTCCACCGCCAGCGCAGAGACCACCGCACCGGCTCGGGTCTTTTTCCAGCCCGGCGTGGGATGCGCGGGTTCCAGCCCGATGCAACGGGATGACCCGGTGCAGAAAAAGCAAGGCAAAGTGACGGTGAAATACGACCGAAAGGAGCTGCGGAAAAGACTCATTCTTGAGGAATGGATCATTGAGCAACTGAGCGAACTTTACGACTGCGAGGAAGAGGAAATGCCGGAAGTGGAGATCGACATCGATGATCTCCTGGAGGTGAACAGTGAAGACGAGAGAGCCGTCAAACTGCAGGAATCACTGTCAGACTGCTACAAGCCTACTGATGACTTTGTCCGTGAGCTGCTCGGCAGGATAAGAGGAATGAGAAAACTCAGCGCCCCGCAAAAGAAAAGCTTCTAAGTGCTCACAAATGCAGCGACAATCCAGCTACCTGGACTCCATGTCCCACAATCCATCACTCAGCCTACAGCCAATCTCATCCATATCCAAGGATTCATTTCAGGCCAGGAATCAATAAAACCAGAGTTCATTTTCCAAGGACTCGTATCCCACATTGCAACATCTAAACGGAGCGATCCGCTTTCCAATAATCCCACAATAAATCCAAGAGTGCAAAAGTTAACCCGGGACACTCAGGGCTATACAGGCCCAATTAGTACACTGTTAGGTGCAGTATTACAGCTTTTTTTATGAAACCACAAGCTCTTTTATTAAGTatgatttacatatttattttcatttaaagtctgctgttttttttttcttgggaaactgatactgttttttttatttttatgtttttatctcCACCTCTGATTCTGGATCAGCAGTGATGGCCAATATTCATTAGCATCCGTCCTGTTAAATTCGTCATATTGAAGCATGGTGTAATACTTAGGATCATAACCTACTTTTAAGTCATATAACTGATCAGACTACATATCAATACCTGTTTTAATACAACTTTCAAGAATGGTTAACCGTTCTGGTGAAAATAACTACTTTCATAAAGTGAATATGATTAAAGTACATTAAGAGTTGAGAGTGATTTTGGGATGTATTGCTAGAAAGTCAAGGAAAAAGGCTATATTGGGAATTAAACACTAGTGACTGTTCAAGTATACACTGAACTTTATATTATAGAGGGTTGATTGCATTCAGTTGTGGATTATAGTTTTCTGAATTGCATATTTTGGCAAATGCATTCATGCAATGTAGCATACATGTTGTAAACTTTTTAGTATTCGAGCGTATTCTAGTATGCTATTGCGAACATAGCCTGAGATTTGAATGCTTTTAAAAGACAACAAGGGCTGCATGACAGTGGATCAAGCACAATTTCACAGAAAAGCATAACTGTTTGGCATACATATTGGCAAAATGCGTACTAATATTACTAAAACATACAAATGTTCGAAAGAAGGCATGCCCGAAAGCTTGGGGCACGATcaaataatactaaaatgtaTTGATGGGATATGAATTTAGAGCTGTGGCAAAAAACTTTAAGATATGAGTCTGcaattttcaaaatgcattgctATTCTCTCTTAAATGGATTCGGAgtttagtttataacagcagatctGTGTAATACTACAAAATCAACATAAATGATGTGGATTCTCTCAGATCGCCTCCCTGTGGGGAATCACTGAACAGGTTTCATTGGTTTTGCCTGATATCCAATCAGTTTCATTAGTTGGTAGATGtttaatttgtaaaatgaaaagaaatattaTTAGTTAATAGTCTCTTGTTGGCCTGTTTAGCAGAGTCCACCATAGAAAAAACGATGTAGAAGCATTGAAAATATACACAATAATGCATGATATACAGATATTTAATGACATTAGATAACATGCTTTTGCGTGCATTTATAGTTTATACTGTCAATTTAAAGTTCACAATGTTATCAAATATCTAGCATGTGGTGTTTTGAAAACTTCCAAACAGTGAAACGGCTTAGttcttctgctgttaaaaactatcccagagcgccatctactgttaaaatctagcctagagtgccacctattgttaaaaactagcctatacaGCAGAGCTCTATCTGatgtaaaacaaataagcctagagcACAACcaactgttaaaaactatcctagaactccgtctgctgttaaaatctagccttgAGTGCCAcctattgttaaaaactagcctagagtgtcatctgctctatacaaataaacttgaataaaattgaatctgctgtaaaaactatcctagagcgccatctactgttaaaatctagcctagagcaccatctgtggttaaaaaaaaacagcctagagCTCTATCTGATGTAAAACGAATGAGCCTAGAGCACAACcaactgttaaaaactatcctagagctccgtctgctgttaaaatctagccttgAGTGCCAcctattgttaaaaactagcctagagtgtcatctgctcTATACAAATAAATTTGAATTACATTGAATCTGCTGTTTAAAAGTATCCTAGAgtaccatctactgttaaaatctaggctagagcatcatctgtggttaaaaactagcctacagagCCATCAACTGTTAAAAACGAccatagagcgccatctactgttaaaatctAGGCTAGAGCGTCATctgtggttaaaaactagcctacagtgcCATCAACTGTTAAAAATgaccctagagcgccatctgctgttaaaatttaGCCTAGAACATCATttgtggttaaaaactagcctagagcgatatctgctgttagaaactagcttCAAGGGCCATTTGCTGTCAAAAGTTAGTCTATAGCacaatctactgttaaaaacaatactagagcgccatctactgttaaaaataaGCCTTGAGCGCCATCTACCAATATAAAAATAGCCTTCTGCGCCACCTGCTATTAAAATCGAGCCCAGAGATACACCTAGAGCGCaatctactgttaaaaatgagcctagagcaccatctactaaTAAAAAAAGCCTTCtgtgccacctgctgttaaaaactagcctagagcgatgtCTGCtgaaaaaaactagcctagagagacACCTAGTGCgcaatctactgttaaaaacaagccttgATCGCCATCTACTAATATAAAATAGCCTTCTGCACCACCTGCTGTAAACAACAAGCATAGAGCGACACCTAGAGCGTCATctagtgttaaaaactagcctacagcgctatctgctgttaaaatctaggcTGTAGACACCTAGAGCGCCATGTGCTATTAAAATCGAGCCTAGAGAGacacctagagcgccatctactgttaaaaatgagcctagagcgccatctactgatAAAAAATAGCCTTCtgtgccacctgctgttaaaaactagcctagagcgatgtctgctgttaaaaacgagCCTAGAGAGacacctagagcgccatctactgttaaaaacaagccttgAGCGCTATCTACTAATATAAAATAGCCTTCTGCGctacctgctgttaaaaactagcctagagcgacacctagagcgccatctagtgttaaaaactagccttcagcgctatctgctgttaaaatctagcatGTAGAGacacctagagcgccatctagtgttaaaaactagcctacagcgctatctgctgttaaaatctagcctgtAGAGacacctagagcgccatctagtgttaaaaactagcctacagcgctatatgctgttaaaatctagcctgtAGAGACACCTAGAgcgcaatctgctgttaaaaattaagcCTAGAGAGACGCAGaccaccatctactgttaaaaatgagcctagagcgccatctactgatAAAAAATCTTCTGTGCCaccttctgttaaaaactagcctagagtgatatctgctgttaaaaacgagCCTAGAGAGacacctagagcgccatcttctgttaaaaacaagccttgAGCACTATGTACTAACATAAAATAGCCTTCtgcgccacctgctgttaaaaactagcctagagcgacacctagagcgccatctagtgttaaaaactagcctacagcgctatctgctgttaaaatctagcctgtAGAGacacctagagcgccatctgctgttaaaaatcaaGCCTAGAGAcacagagcaccatctactgttaaaaattagcctagaacgccatctacTGATAAAAAATATCCTTCtgtgccacctgctgttaaaatctagcctagagggatatctgctgttaaaaacgagCCAAGAGAGacacctagagcgccatctactgttaaaatctagcctagagacacctagagcgccatctgccattaaaaactagcctagagcacaatctactgttaaaaactagcctagagagccatctactgttaaaacctagcatagagcgccatctgctgtcaaaaactaagctcagaattgATTCAACAGAGAATTTAGAAAATTTAATAATCGCTTTCTCAAAGTTTTTTGTTTGCCACAGCTCTTTACGAATTAGCCAGCAAGTAAAATAGCTATGAATTTCCGTGAGGTCGCGTTGGTAGATCTTCACGACATACATGCTGTGTCTATCGATAGCTGGAGACGTATCTAGTTTGACTCGAGCCATGACTGAAATCTCCTAATATTGTTAGGCTTTTATCCGGTTTCAAACGGAGCCTGCCAAAGAATATAAAATGGCTGAATATTAGCAGTACAAAGTGCTACGGGTGTAAACTGATACATGTATATTCTGTTTCGCTATAAAGAACATTTAATCTTTGTGTCATACTCATGGGTCAGATTTGTGTTTGATGGTGTACGTGGCGTAACAAGGAATCCAGGGGAAAACTATGGTGCTGTTTAAACCTTTAAACCTATATACAGTGCTTTGCAGGCCGAGAGAGAAAGAATAACTGGAGATTCGCTCTGGATGAATCTACTATTTTTATGAGTTTCTGTCAGCCTGCATCTAACTACCATTGTGGGTTTTTAAAAGGTTTGCGTGTGTTTGATTATGCTTCGACCCTTCTCTCTGAGAAGACCGTTCAGGGTTTAggctaattttatttaatttcgtTTCTAAAATGTCGAGGTTTTGAGCGTACGAAAGCtttatttatgcatgttttaTTGGCATGATGGGAACATTATGGATTGCTTTCTTAAAGCGATGATTTGtcttttttatacattattacaAGTATTACTCTTTTAACTATTAAAGTCAcgactttttattcactgtatatcTGCGTTTTGGGTGTTTtgaatttcttttgttttttattatatatgtaaagTGTGGTCTTTTGTGCTGTTCTACTTATAATAAAGGCAAAATGTCTGAACTGTTATAATAAAA

Function

symbol description
ppp1r14c Predicted to enable protein serine/threonine phosphatase inhibitor activity. Predicted to act upstream of or within regulation of phosphorylation. Predicted to be located in cytoplasm. Orthologous to human PPP1R14C (protein phosphatase 1 regulatory inhibitor subunit 14C).

GO:

id name namespace
GO:0042325 regulation of phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0004865 protein serine/threonine phosphatase inhibitor activity molecular_function

KEGG:

id description
ko01009 Protein phosphatases and associated proteins

ZFIN:

id description
ZDB-GENE-050706-92 Predicted to enable protein serine/threonine phosphatase inhibitor activity. Predicted to act upstream of or within regulation of phosphorylation. Predicted to be located in cytoplasm. Orthologous to human PPP1R14C (protein phosphatase 1 regulatory inhibitor subunit 14C).

Ensembl:

ensembl_id ENSDARG00000077341

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044514 True 5434 mRNA 0.40 4 39807857 39849155

Neighbor

gene id symbol gene type direction distance location
XLOC_022584 IYD coding downstream 23489 39774931 ~ 39784368 (-)
XLOC_022583 SIKE1 coding downstream 35750 39755641 ~ 39772107 (-)
XLOC_022582 micos10 coding downstream 56623 39744369 ~ 39751234 (-)
XLOC_022581 htr6 coding downstream 69802 39730965 ~ 39738055 (-)
XLOC_022580 vwa1 coding downstream 141199 39632397 ~ 39666658 (-)
XLOC_022586 NA coding upstream 91085 39940240 ~ 39942116 (-)
XLOC_022587 CU657980.2 coding upstream 95497 39944652 ~ 39945578 (-)
XLOC_022588 CU657980.1 coding upstream 102398 39951553 ~ 39952406 (-)
XLOC_022589 xcr1a.1 coding upstream 109011 39958166 ~ 39959784 (-)
XLOC_022590 tgm1l2 coding upstream 336226 40185381 ~ 40194732 (-)
XLOC_022579 NA non-coding downstream 272963 39527970 ~ 39534894 (-)
XLOC_022578 NA non-coding downstream 352735 39415030 ~ 39455122 (-)
XLOC_022577 NA non-coding downstream 795495 39011955 ~ 39012362 (-)
XLOC_022576 NA non-coding downstream 857947 38947827 ~ 38949910 (-)
XLOC_022575 NA non-coding downstream 943002 38859575 ~ 38864855 (-)
XLOC_022593 NA non-coding upstream 529498 40378653 ~ 40407945 (-)
XLOC_022594 NA non-coding upstream 610797 40459952 ~ 40506113 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G12648 NA non-coding CI01000001 null 414496 ~ 416841 (+)
striped catfish (Pangasianodon hypophthalmus) G258459 ppp1r14c,LOC107697847,LOC107738512,LOC107664259 non-coding NC_047610.1 CM018556.1 21115050 ~ 21132053 (+)