XLOC_022614


Basic Information

Item Value
gene id XLOC_022614
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 41657180 ~ 41659516 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044755
GAGCAGTtccagatgtgtaatctctggaGGCCCTCACTGATTTCAGCAGCCGTCCGTCCTGCCCTGATGTCCCAGACTCACGCCCTTCATCAAAACTGCACAACCACCAGAGAAACCTTCAATTCCACTCAGATTCTCATCAAAACAAGATGTCGCTATTGGACTCATGGACCGAAGGAAAATGCTTTAATGGACAGTTCATCTACTCATTCATGACAAATTCTCCATTTTATTAATCTTTAAGAGcttttttcttctgatgaacacaaaggattgcattatgaattttttttactgatgtaattttttttaaacttagatTACTCTAATCATAaggggttacactttattttaaaggagacctaatatgcaaaaatcatttttataaggGGTGTAAACACAGTTGTATGGCAACAGTGTGTGGATATAATCAGCCTCTAATGGTACAAATCTATtcattttactctttactccaaTCTCACTTGATAACAGTCTGCAgacacactttgattgacattttccctttgtacaTGGCATCAAAAAGGGAAAACCCCGCCCATTGGTGAgaatctcttcctcattagcatacaTCATTAGTCTTGTTTCTGAGtctgccattatgctgacacacaggcatttgtagcctcaccctctttttaaaagagtacaatctcatttgaatttaaagcggcagtcaccaaaacagcacaatttgaaTCAAGACACAAAAGTGTCAGTTTCAAAtagtttaaaacattatttgtgttgaagtgttgtcacgatactgaaatcCAATACCAATcggaactctttggagtgaatgccaggaaTTAAGTTTGGCAGCGCTCATCTCCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044755 True 856 lncRNA 0.38 2 41657180 41659516

Neighbor

gene id symbol gene type direction distance location
XLOC_022613 si:ch73-184c24.1 coding downstream 5421 41629503 ~ 41651759 (-)
XLOC_022612 NA coding downstream 39161 41612769 ~ 41618019 (-)
XLOC_022610 scube3 coding downstream 71404 41313084 ~ 41585776 (-)
XLOC_022611 CABZ01056817.1 coding downstream 311322 41345744 ~ 41345858 (-)
XLOC_022609 NA coding downstream 352135 41303512 ~ 41305045 (-)
XLOC_022615 stk35 coding upstream 80205 41739721 ~ 41762956 (-)
XLOC_022616 GMEB2 coding upstream 140890 41800406 ~ 41824460 (-)
XLOC_022617 NA coding upstream 195623 41855139 ~ 41857539 (-)
XLOC_022618 NA coding upstream 277488 41937004 ~ 41937979 (-)
XLOC_022619 slc1a7b coding upstream 290059 41949575 ~ 42093537 (-)
XLOC_022608 CABZ01056821.1 non-coding downstream 369731 41287333 ~ 41287449 (-)
XLOC_022607 NA non-coding downstream 657955 40996451 ~ 40999225 (-)
XLOC_022621 NA non-coding upstream 672403 42331919 ~ 42334991 (-)
XLOC_022622 NA non-coding upstream 702529 42362045 ~ 42454539 (-)
XLOC_022623 CU013526.2 non-coding upstream 744048 42403564 ~ 42403680 (-)

Expression


Co-expression Network