XLOC_022618


Basic Information

Item Value
gene id XLOC_022618
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 41937004 ~ 41937979 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044756
tatagtatgaattagcatgttactagcatgattctagcatgaattagcatgttactagtatgattctagcatgaattagcatgttactagcatgattctagtatgaagtagcctgttactatcatgaatctagtataaattagcaggttattagcatgattctagcatgaattagcatgattctagtatgaattagcatgttactagaatgattttagcatgaattagcatgttactcgcatgattctagcatgaattagcatgttattagcatgattctagtatgaattaacatgttactagcatgattctagcgtgaattagcatgttattagcatgattttagcatgcattagcatgttactagcatgattctagtatgaattagcatgttattagcatgattctagcatgaattagcatgttattagcatgattgtagtatgaattagcatgttactagcatgattctagtatgaattagcatgtcacatagcatgcttaggtggttgctaggttattctgagtggttgctaagttgttgctaggcagttgctagggtgtcctgagtggttgctaggtggttgctaagatgttgctaggcggttgctagggtgttgctaggtggttgctagggtgttctgagtggttgctaggtggttgctaaggcattgctaggcggttgctagggtgttctgagtggttgctaggttgttgctaggcagttgctagggttgtctgattggttgctaggtggttgctaaggtcttgctaggcggttgctagggtgttctgtgtggttgctaagatgttgctaggtggttgctagggtgttctgagtggttgctaaggtgttgctaggcggttgctagggtgttctaagtggttgctaggttgttgctaaggtgatgctaggtggttgctagggtgttctgagtggttgctaggtggttgctaaggagtcctaagtggttgc

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0048468 cell development biological_process
GO:0030154 cell differentiation biological_process
GO:0000902 cell morphogenesis biological_process
GO:0000904 cell morphogenesis involved in differentiation biological_process
GO:0030182 neuron differentiation biological_process
GO:1990138 neuron projection extension biological_process
GO:0048812 neuron projection morphogenesis biological_process
GO:0007275 multicellular organism development biological_process
GO:0120036 plasma membrane bounded cell projection organization biological_process
GO:0120039 plasma membrane bounded cell projection morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0048858 cell projection morphogenesis biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0032990 cell part morphogenesis biological_process
GO:0061564 axon development biological_process
GO:0030030 cell projection organization biological_process
GO:0048666 neuron development biological_process
GO:0048667 cell morphogenesis involved in neuron differentiation biological_process
GO:0007399 nervous system development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0048675 axon extension biological_process
GO:0007409 axonogenesis biological_process
GO:0022008 neurogenesis biological_process
GO:0048699 generation of neurons biological_process
GO:0031175 neuron projection development biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044756 True 976 lncRNA 0.41 1 41937004 41937979

Neighbor

gene id symbol gene type direction distance location
XLOC_022617 NA coding downstream 79465 41855139 ~ 41857539 (-)
XLOC_022616 GMEB2 coding downstream 112544 41800406 ~ 41824460 (-)
XLOC_022615 stk35 coding downstream 174048 41739721 ~ 41762956 (-)
XLOC_022614 NA coding downstream 277488 41657180 ~ 41659516 (-)
XLOC_022613 si:ch73-184c24.1 coding downstream 285245 41629503 ~ 41651759 (-)
XLOC_022619 slc1a7b coding upstream 11596 41949575 ~ 42093537 (-)
XLOC_022620 gpx7 coding upstream 281634 42219613 ~ 42232124 (-)
XLOC_022621 NA coding upstream 393940 42331919 ~ 42334991 (-)
XLOC_022622 NA coding upstream 424066 42362045 ~ 42454539 (-)
XLOC_022623 CU013526.2 coding upstream 465585 42403564 ~ 42403680 (-)
XLOC_022612 NA non-coding downstream 318985 41612769 ~ 41618019 (-)
XLOC_022611 CABZ01056817.1 non-coding downstream 591146 41345744 ~ 41345858 (-)
XLOC_022609 NA non-coding downstream 631959 41303512 ~ 41305045 (-)
XLOC_022624 CT997819.3 non-coding upstream 570755 42508734 ~ 42515002 (-)
XLOC_022625 NA non-coding upstream 684366 42622345 ~ 42627442 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location