XLOC_022622


Basic Information

Item Value
gene id XLOC_022622
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 42362045 ~ 42454539 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045131
CCAAGTCTAACTTCAGGAGAGCCGTAAACATGATGACAGATTGAGTTCAggacaaacacaacagcagcagAGGGTCAGGAGCTTTATAACAGAGGGAGGAGGTGGAGACAGAAAGAGTTTGATCTGATGTGAAGCCTTTCAGTCCTGTCTTTATCCCCACTCATACAGAAGGGCATTTGCAAAATATTACCCAGAGTACCTAAGTTGATTAAAACAATCAATGACTTAACTGTAACATACTAATGTGTTGAAAACACTGTGAAACTGCTTTTGATGTCATTCTTTCTGATTGCTTTTTCTTCATACAGCTTGAGCAATACCAACCCCCAAATCCAGCTGAGCCATCAT
>TCONS_00044553
AGATCTTTTGAAGCCCATCGGGTTCTTCAATAAATGTGGTAAGTTTCCCACAAAAGGCAGAGGTGTTGGACCAGGTGGAAATCGACCTTTGTATGAATAAATCCTGAAGATCTCAAACAGAACCAGAAAAATTAAGCCCAGGAACAGAGTCAAGCCCACAGAGGCCAAGTCTAACTTCAGGAGAGCCGTAAACATGATGACCAGTTCAGTTCAGgacaaaacacaacagcagtATAGAATCAGGAGCTTTATAACAGCAGAAGAGGGAGGAGACAGAGAGAGATTGACCTGCTGTTAACGCCTTTCAGTCCTGTCTTCATCCTCTACCCAAACAGAGCCCCGCATCTTATGAATAAAATCTGTTGATTTGCAAAAAATTACCTAAAAGTACCTGATTTGACATGATACTTACGAAAGTAGTTTGTTTGATTCACACTGCCTGGAAAATTATTGGTGTATCAGAGCTGATGTCACTGCAGGATATGTATGAACAGGACGCATTAAGATGTGCTAAACAAATAGCTTGTGACGTATCACATTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

Ensembl:

ensembl_id ENSDARG00000102292

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045131 False 348 lncRNA 0.41 2 42362045 42414711
TCONS_00044553 True 541 lncRNA 0.41 2 42414335 42454539

Neighbor

gene id symbol gene type direction distance location
XLOC_022621 NA coding downstream 27054 42331919 ~ 42334991 (-)
XLOC_022620 gpx7 coding downstream 129921 42219613 ~ 42232124 (-)
XLOC_022619 slc1a7b coding downstream 268508 41949575 ~ 42093537 (-)
XLOC_022618 NA coding downstream 424066 41937004 ~ 41937979 (-)
XLOC_022617 NA coding downstream 504506 41855139 ~ 41857539 (-)
XLOC_022624 CT997819.3 coding upstream 54195 42508734 ~ 42515002 (-)
XLOC_022625 NA coding upstream 167806 42622345 ~ 42627442 (-)
XLOC_022626 si:ch73-217n20.1 coding upstream 271622 42726161 ~ 42752550 (-)
XLOC_022627 pfkfb2a coding upstream 311161 42765700 ~ 42810664 (-)
XLOC_022628 NA coding upstream 374094 42828633 ~ 42831162 (-)
XLOC_022614 NA non-coding downstream 702529 41657180 ~ 41659516 (-)
XLOC_022612 NA non-coding downstream 744026 41612769 ~ 41618019 (-)
XLOC_022630 CABZ01066224.1 non-coding upstream 430064 42884603 ~ 42906528 (-)
XLOC_022631 BX004770.1 non-coding upstream 566655 43021194 ~ 43125946 (-)

Expression


Co-expression Network